| MirGeneDB ID | Cja-Mir-362-P4 |
|---|---|
| Family name | MIR-362 (all species) |
| Seed | AUCCUUG |
| Species | White-tufted-ear marmoset (Callithrix jacchus) |
| MiRBase ID | |
| Paralogues | Cja-Mir-362-P3a-v1 Cja-Mir-362-P3a-v2 Cja-Mir-362-P5 |
| Orthologues | Bta-Mir-362-P4 Cfa-Mir-362-P4 Cpo-Mir-362-P4 Dno-Mir-362-P4 Eca-Mir-362-P4 Ete-Mir-362-P4 Hsa-Mir-362-P4 Laf-Mir-362-P4 Mml-Mir-362-P4 Mmr-Mir-362-P4 Mmu-Mir-362-P4 Ocu-Mir-362-P4 Pab-Mir-362-P4 Rno-Mir-362-P4 |
| Node of Origin (locus) | Eutheria |
| Node of Origin (family) | Eutheria |
| Genome context (GCA_011100555.2_mCalJa1.2.pat.X_genomic) |
CM021937.1: 48750538-48750596 [+] UCSC Ensembl |
| Precursor (pre-Mir +30nt flank) | CCAGAACCUUCUCAUCUGCUUCCCCUCUCGAAUCCUUGGAACCUAGGUGUGAGUGCUAUUUCAAUGCAACACACCUAUUCAAGGAUUCAAAGAGGUUGAGCCUUGUCUGCAUGUAGAAGGet precursor sequence |
| Structure | 10 20 30 40 50 60 CCAGAACCUUCUCAUCU- CC C-| ACC AG UAUU GCUU CCUCU GAAUCCUUGGA UAGGUGUG UGC \ CGAG GGAGA CUUAGGAACUU AUCCACAC ACG U GAAGAUGUACGUCUGUUC UU AA^ --- A- UAAC 110 100 90 80 70 |
| Deep sequencing | |
| 3' NTU | No |
| Motifs | UG at 5p(-14), CNNC at 3p(+17) |
| Mature sequence | Cja-Mir-362-P4_5p |
| mirBase accession | None |
| Sequence |
0- AAUCCUUGGAACCUAGGUGUGAGUGC -26
Get sequence
|
| Star sequence | Cja-Mir-362-P4_3p* |
| mirBase accession | None |
| Sequence |
36- CAACACACCUAUUCAAGGAUUCA -59
Get sequence
|
