MirGeneDB 3.0
MirGeneDB ID

Cja-Mir-362-P4

Family name MIR-362 (all species)
Seed AUCCUUG
Species White-tufted-ear marmoset (Callithrix jacchus)
MiRBase ID
Paralogues Cja-Mir-362-P3a-v1  Cja-Mir-362-P3a-v2  Cja-Mir-362-P5 
Orthologues Bta-Mir-362-P4  Cfa-Mir-362-P4  Cpo-Mir-362-P4  Dno-Mir-362-P4  Eca-Mir-362-P4  Ete-Mir-362-P4  Hsa-Mir-362-P4  Laf-Mir-362-P4  Mml-Mir-362-P4  Mmr-Mir-362-P4  Mmu-Mir-362-P4  Ocu-Mir-362-P4  Pab-Mir-362-P4  Rno-Mir-362-P4 
Node of Origin (locus) Eutheria
Node of Origin (family) Eutheria
Genome context
(GCA_011100555.2_mCalJa1.2.pat.X_genomic)		 CM021937.1: 48750538-48750596 [+] UCSC Ensembl
Precursor
(pre-Mir +30nt flank)
CCAGAACCUUCUCAUCUGCUUCCCCUCUCGAAUCCUUGGAACCUAGGUGUGAGUGCUAUUUCAAUGCAACACACCUAUUCAAGGAUUCAAAGAGGUUGAGCCUUGUCUGCAUGUAGAAG
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Structure
        10         20         30        40        50        60 
CCAGAACCUUCUCAUCU-    CC     C-|          ACC        AG   UAUU 
                  GCUU  CCUCU  GAAUCCUUGGA   UAGGUGUG  UGC    \
                  CGAG  GGAGA  CUUAGGAACUU   AUCCACAC  ACG    U
GAAGAUGUACGUCUGUUC    UU     AA^          ---        A-   UAAC 
       110       100        90        80           70
Deep sequencing
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3' NTU No
MotifsUG at 5p(-14), CNNC at 3p(+17)
Tissue expression
-   +
To
Mature sequence

Cja-Mir-362-P4_5p
mirBase accessionNone
Sequence 
0- AAUCCUUGGAACCUAGGUGUGAGUGC -26
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Star sequence

Cja-Mir-362-P4_3p*
mirBase accessionNone
Sequence 
36- CAACACACCUAUUCAAGGAUUCA -59
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