MirGeneDB 3.0
MirGeneDB ID

Cja-Mir-362-P3a-v1

Family name MIR-362 (all species)
Seed AUGCACC
Species White-tufted-ear marmoset (Callithrix jacchus)
MiRBase ID
Paralogues Cja-Mir-362-P3a-v2  Cja-Mir-362-P4  Cja-Mir-362-P5 
Orthologues Bta-Mir-362-P3a-v1  Bta-Mir-362-P3a-v2  Bta-Mir-362-P3a-v3  Cfa-Mir-362-P3a-v1  Cfa-Mir-362-P3a-v2  Dno-Mir-362-P3a-v1  Dno-Mir-362-P3a-v2  Eca-Mir-362-P3a-v1  Eca-Mir-362-P3a-v2  Hsa-Mir-362-P3a-v1  Hsa-Mir-362-P3a-v2  Mml-Mir-362-P3a-v1  Mml-Mir-362-P3a-v2  Mmr-Mir-362-P3a-v1  Mmr-Mir-362-P3a-v2  Ocu-Mir-362-P3a  Pab-Mir-362-P3a-v1  Pab-Mir-362-P3a-v2 
Node of Origin (locus) Eutheria
Node of Origin (family) Eutheria
Genome context
(GCA_011100555.2_mCalJa1.2.pat.X_genomic)		 CM021937.1: 48749996-48750057 [+] UCSC Ensembl
Precursor
(pre-Mir +30nt flank)
GGCAGGGCUUUGUGCUCUGCUCCCCCUCUCUAAUCCUUGCUACCUGGGUGAGAGUGCUGUCUGAAUGCAAUGCACCUGGGCAAGGAUUCUGAGAGCGAGAGCUUCAUCUUCGUGUAGGAUGG
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Structure
        10          20        30         40        50        60  
GGCAGGGCUUUGUGCUCU--    CCC     U-|        UAC UG    AGAG  CUGUC 
                    GCUC   CUCUC  AAUCCUUGC   C  GGUG    UG     \
                    CGAG   GAGAG  UUAGGAACG   G  CCAC    AC     U
GGUAGGAUGUGCUUCUACUU    AGC     UC^        --- GU    GUA-  GUAAG 
120       110       100        90        80           70
Deep sequencing
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3' NTU Unknown
MotifsCNNC at 3p(+17)
Tissue expression
-   +
To
Star sequence

Cja-Mir-362-P3a-v1_5p* (predicted)
mirBase accessionNone
Sequence 
0- UAAUCCUUGCUACCUGGGUGAGAGUG -26
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Mature sequence

Cja-Mir-362-P3a-v1_3p (predicted)
mirBase accessionNone
Sequence 
38- AAUGCACCUGGGCAAGGAUUCUGA -62
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