MirGeneDB ID | Hsa-Mir-362-P3a-v1 |
---|---|
Family name | MIR-362 (all species) |
Seed | AUGCACC |
Species | Human (Homo sapiens) |
MiRBase ID | hsa-mir-500a |
Paralogues | Hsa-Mir-362-P3a-v2 Hsa-Mir-362-P3b Hsa-Mir-362-P4 Hsa-Mir-362-P5 Hsa-Mir-362-P6 |
Orthologues | Bta-Mir-362-P3a-v1 Bta-Mir-362-P3a-v2 Bta-Mir-362-P3a-v3 Cfa-Mir-362-P3a-v1 Cfa-Mir-362-P3a-v2 Cja-Mir-362-P3a-v1 Cja-Mir-362-P3a-v2 Dno-Mir-362-P3a-v1 Dno-Mir-362-P3a-v2 Eca-Mir-362-P3a-v1 Eca-Mir-362-P3a-v2 Mml-Mir-362-P3a-v1 Mml-Mir-362-P3a-v2 Mmr-Mir-362-P3a-v1 Mmr-Mir-362-P3a-v2 Ocu-Mir-362-P3a Pab-Mir-362-P3a-v1 Pab-Mir-362-P3a-v2 |
Node of Origin (locus) | Eutheria |
Node of Origin (family) | Eutheria |
Genome context (hg38) |
chrX: 50008443-50008504 [+] UCSC Ensembl |
Clustered miRNAs (< 50kb from Mir-362-P3a-v1) |
Mir-188-P1
chrX: 50003167-50003225 [+]
UCSC
Ensembl
Mir-188-P2 chrX: 50003517-50003576 [+] UCSC Ensembl Mir-362-P3a-v1 chrX: 50008443-50008504 [+] UCSC Ensembl Mir-362-P3a-v2 chrX: 50008443-50008504 [+] UCSC Ensembl Mir-362-P4 chrX: 50008968-50009026 [+] UCSC Ensembl Mir-362-P5 chrX: 50009735-50009794 [+] UCSC Ensembl Mir-362-P3b chrX: 50010681-50010742 [+] UCSC Ensembl Mir-188-P3 chrX: 50013256-50013314 [+] UCSC Ensembl Mir-362-P6 chrX: 50014612-50014671 [+] UCSC Ensembl |
Precursor (pre-Mir +30nt flank) | CACAGGGCUUUGUGUUCUGCUCCCCCUCUCUAAUCCUUGCUACCUGGGUGAGAGUGCUGUCUGAAUGCAAUGCACCUGGGCAAGGAUUCUGAGAGCGAGAGCUUCAUCUUCGUGUAGGACAGGet precursor sequence |
Structure | 10 20 30 40 50 60 CACAGGGCUUUGUGUUCU-- CCC U-| UAC UG AGA- GCUGU GCUC CUCUC AAUCCUUGC C GGUG GU \ CGAG GAGAG UUAGGAACG G CCAC CG C GACAGGAUGUGCUUCUACUU AGC UC^ --- GU GUAA UAAGU 120 110 100 90 80 70 |
Deep sequencing | |
3' NTU | No |
Motifs | CNNC at 3p(+17) |
Star sequence | Hsa-Mir-362-P3a-v1_5p* |
mirBase accession | MIMAT0004773 |
Sequence |
0- UAAUCCUUGCUACCUGGGUGAGAGU -25
Get sequence
|
Proposed targets |
microrna.org: MIMAT0004773 TargetScanVert: hsa-miR-500a-5p TargetMiner: hsa-miR-500a-5p miRDB: MIMAT0004773 |
Mature sequence | Hsa-Mir-362-P3a-v1_3p |
mirBase accession | MIMAT0002871 |
Sequence |
38- AAUGCACCUGGGCAAGGAUUCUGA -62
Get sequence
|
Proposed targets |
microrna.org: MIMAT0002871 TargetScanVert: hsa-miR-500a-3p TargetMiner: hsa-miR-500a-3p miRDB: MIMAT0002871 |