| MirGeneDB ID | Pab-Mir-362-P3b |
|---|---|
| Family name | MIR-362 (all species) |
| Seed | AAUCCUU |
| Species | Sumatran orangutan (Pongo abelii) |
| MiRBase ID | |
| Paralogues | Pab-Mir-362-P3a-v1 Pab-Mir-362-P3a-v2 Pab-Mir-362-P4 Pab-Mir-362-P5 Pab-Mir-362-P6 |
| Orthologues | Bta-Mir-362-P3b-v1 Bta-Mir-362-P3b-v2 Cfa-Mir-362-P3b Cpo-Mir-362-P3b Dno-Mir-362-P3b Eca-Mir-362-P3b-v1 Eca-Mir-362-P3b-v2 Hsa-Mir-362-P3b Mml-Mir-362-P3b Mmr-Mir-362-P3b-v1 Mmr-Mir-362-P3b-v2 |
| Node of Origin (locus) | Eutheria |
| Node of Origin (family) | Eutheria |
| Genome context (GCA_028885655.2_NHGRI_mPonAbe1-v2.0_traces) |
CM054702.2: 50287048-50287109 [+] UCSC Ensembl |
| Precursor (pre-Mir +30nt flank) | CUGGAAUCUUCUGUCCUGGUUCCCCCUCUCUAAUCCUUGCUACCUGUGUGAGAGUGCUUUCUGAAUGCAGUGCACCCAGGCAAGGAUUCUGCAAGGGGGAGUGACAUCUUCGCAUAGGACAGGet precursor sequence |
| Structure | 10 20 30 40 50 60 CUGGAAUCUUCUGUCCUGG-- CUCU-| ACCU AGA GCUUU UUCCCCCU AAUCCUUGCU GUGUG GU \ GAGGGGGA UUAGGAACGG CACGU CG C GACAGGAUACGCUUCUACAGU ACGUC^ ACC- GA- UAAGU 120 110 100 90 80 70 |
| Deep sequencing | |
| 3' NTU | Unknown |
| Motifs | UG at 5p(-14), CNNC at 3p(+17) |
| Mature sequence | Pab-Mir-362-P3b_5p (predicted) |
| mirBase accession | None |
| Sequence |
0- UAAUCCUUGCUACCUGUGUGAGAGU -25
Get sequence
|
| Star sequence | Pab-Mir-362-P3b_3p* (predicted) |
| mirBase accession | None |
| Sequence |
38- AGUGCACCCAGGCAAGGAUUCUGC -62
Get sequence
|
