MirGeneDB 3.0
MirGeneDB ID

Dno-Mir-188-P1

Family name MIR-188 (all species)
Seed AUGCCUU
Species Nine-banded armadillo (Dasypus novemcinctus)
MiRBase ID dno-mir-532
Paralogues Dno-Mir-188-P2  Dno-Mir-188-P3 
Orthologues Bta-Mir-188-P1  Cfa-Mir-188-P1  Cja-Mir-188-P1  Cpo-Mir-188-P1  Eca-Mir-188-P1  Hsa-Mir-188-P1  Laf-Mir-188-P1  Mml-Mir-188-P1  Mmr-Mir-188-P1  Mmu-Mir-188-P1  Ocu-Mir-188-P1  Pab-Mir-188-P1  Rno-Mir-188-P1 
Node of Origin (locus) Eutheria
Node of Origin (family) Eutheria
Genome context
(dasNov3)		 JH569306: 1544821-1544879 [+] UCSC Ensembl
Clustered miRNAs
(< 50kb from Mir-188-P1)		 Mir-188-P1 JH569306: 1544821-1544879 [+] UCSC Ensembl
Mir-188-P2 JH569306: 1545145-1545204 [+] UCSC Ensembl
Mir-362-P3a-v1 JH569306: 1548488-1548549 [+] UCSC Ensembl
Mir-362-P3a-v2 JH569306: 1548489-1548548 [+] UCSC Ensembl
Mir-362-P4 JH569306: 1549504-1549562 [+] UCSC Ensembl
Mir-362-P3b JH569306: 1550649-1550711 [+] UCSC Ensembl
Mir-188-P3 JH569306: 1554037-1554096 [+] UCSC Ensembl
Mir-362-P6 JH569306: 1556109-1556168 [+] UCSC Ensembl
Precursor
(pre-Mir +30nt flank)
AGUGAACCUCCUGACAUGCUUUCUCUCUUACAUGCCUUGAGUGUAGGACUGUGGGCAUCUUAAUUACCCUCCCACACCCAAGGCUUGCAGGAGAGAGAGCCUUCUCCUCCUCUCCAGUG
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Structure
        10          20        30        40        50         
AGUGAACCUCCUGACAU--|           A  U      A    A   CU  GGGCAU 
                   GCUUUCUCUCUU CA GCCUUG GUGU GGA  GU      \
                   CGAGAGAGAGGA GU CGGAAC CACA CCU  CA      C
GUGACCUCUCCUCCUCUUC^           C  U      C    C   CC  UUAAUU 
       110       100        90        80        70        60
Deep sequencing
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3' NTU No
MotifsUG at 5p(-14), CNNC at 3p(+17)
Tissue expression
-   +
To
Mature sequence

Dno-Mir-188-P1_5p
mirBase accessionMIMAT0047963
Sequence 
0- CAUGCCUUGAGUGUAGGACUGU -22
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Star sequence

Dno-Mir-188-P1_3p*
mirBase accessionMIMAT0047964
Sequence 
37- CCUCCCACACCCAAGGCUUGCA -59
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