MirGeneDB 3.0
MirGeneDB ID

Mmu-Mir-188-P1

Family name MIR-188 (all species)
Seed AUGCCUU
Species House mouse (Mus musculus)
MiRBase ID mmu-mir-532
Paralogues Mmu-Mir-188-P2 
Orthologues Bta-Mir-188-P1  Cfa-Mir-188-P1  Cja-Mir-188-P1  Cpo-Mir-188-P1  Dno-Mir-188-P1  Eca-Mir-188-P1  Hsa-Mir-188-P1  Laf-Mir-188-P1  Mml-Mir-188-P1  Mmr-Mir-188-P1  Ocu-Mir-188-P1  Pab-Mir-188-P1  Rno-Mir-188-P1 
Node of Origin (locus) Eutheria
Node of Origin (family) Eutheria
Genome context
(mm10)		 chrX: 7248419-7248477 [-] UCSC Ensembl
Clustered miRNAs
(< 50kb from Mir-188-P1)		 Mir-362-P6 chrX: 7237694-7237754 [-] UCSC Ensembl
Mir-362-P5 chrX: 7241269-7241328 [-] UCSC Ensembl
Mir-362-P4 chrX: 7241984-7242042 [-] UCSC Ensembl
Mir-188-P2 chrX: 7247992-7248051 [-] UCSC Ensembl
Mir-188-P1 chrX: 7248419-7248477 [-] UCSC Ensembl
Precursor
(pre-Mir +30nt flank)
AGCACGCCUACAGAUUUGCUUUUUCUCUUCCAUGCCUUGAGUGUAGGACCGUUGACAUCUUAAUUACCCUCCCACACCCAAGGCUUGCAGGAGAGCAAGCCUUCUCUUCUCUCUCCUGU
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Structure
        10          20        30        40        50         
AGCACGCCUACAGAUUU--|   U       C  U      A    A   CC  UGACAU 
                   GCUU UUCUCUU CA GCCUUG GUGU GGA  GU      \
                   CGAA GAGAGGA GU CGGAAC CACA CCU  CA      C
UGUCCUCUCUCUUCUCUUC^   C       C  U      C    C   CC  UUAAUU 
       110       100        90        80        70        60
Deep sequencing
Go to detailed chart
3' NTU No
MotifsUG at 5p(-14), CNNC at 3p(+17)
Tissue expression
-   +
Br Br Ce Ce Em Em He Ki Li Lu Ov Pa Sk Sp Te
Mature sequence

Mmu-Mir-188-P1_5p
mirBase accessionMIMAT0002889
Sequence 
0- CAUGCCUUGAGUGUAGGACCGU -22
Get sequence
Proposed targets microrna.org: MIMAT0002889
TargetScanVert: mmu-miR-532-5p
miRDB: MIMAT0002889
Star sequence

Mmu-Mir-188-P1_3p*
mirBase accessionMIMAT0004781
Sequence 
37- CCUCCCACACCCAAGGCUUGCA -59
Get sequence
Proposed targets microrna.org: MIMAT0004781
TargetScanVert: mmu-miR-532-3p
miRDB: MIMAT0004781