MirGeneDB 3.0

MirGeneDB ID

Laf-Mir-374-P2

Family name MIR-374 (all species)
Seed UAUAAUA
Species African bush elephant (Loxodonta africana)
MiRBase ID
Paralogues
Orthologues Bta-Mir-374-P2  Cfa-Mir-374-P2  Cja-Mir-374-P2  Eca-Mir-374-P2  Hsa-Mir-374-P2  Mml-Mir-374-P2  Mmu-Mir-374-P2  Ocu-Mir-374-P2  Pab-Mir-374-P2  Rno-Mir-374-P2 
Node of Origin (locus) Eutheria
Node of Origin (family) Eutheria
Genome context
(GCA_000001905.1_Loxafr3.0)
GL010051.1: 27592597-27592648 [+] UCSC Ensembl
Precursor
(pre-Mir +30nt flank)
UGCUUCUCCGAAGAAAUCCUGCUCGGAUGAAUAUAAUACAACCUGCUAAGUGUCCUAGCACUUAUCAGGCUGUAUUAUCAUUGUCCGUGUCUAUGGCUCUCGUCUACCAGAC
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Structure
        10        20          30        40        50     
UGCUUCUCCGAAGAAAUCCU--| U    UG AU        A    C      UC 
                      GC CGGA  A  AUAAUACA CCUG UAAGUG  C
                      UG GCCU  U  UAUUAUGU GGAC AUUCAC  U
CAGACCAUCUGCUCUCGGUAUC^ U    GU AC        C    U      GA 
110       100        90        80        70        60
Deep sequencing
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3' NTU Unknown
MotifsNo
Tissue expression
 +
Wh
Mature sequence

Laf-Mir-374-P2_5p

mirBase accessionNone
Sequence
0- AUAUAAUACAACCUGCUAAGUG -22
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Star sequence

Laf-Mir-374-P2_3p* (predicted)

mirBase accessionNone
Sequence
30- CUUAUCAGGCUGUAUUAUCAUU -52
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