MirGeneDB 3.0

MirGeneDB ID

Cfa-Mir-374-P2

Family name MIR-374 (all species)
Seed UAUAAUA
Species Dog (Canis familiaris)
MiRBase ID cfa-mir-374b
Paralogues Cfa-Mir-374-P1 
Orthologues Bta-Mir-374-P2  Cja-Mir-374-P2  Eca-Mir-374-P2  Hsa-Mir-374-P2  Laf-Mir-374-P2  Mml-Mir-374-P2  Mmu-Mir-374-P2  Ocu-Mir-374-P2  Pab-Mir-374-P2  Rno-Mir-374-P2 
Node of Origin (locus) Eutheria
Node of Origin (family) Eutheria
Genome context
(canFam3_add)
chrX: 57550217-57550268 [-] UCSC Ensembl
Clustered miRNAs
(< 50kb from Mir-374-P2)
Mir-421-P2 chrX: 57550054-57550110 [-] UCSC Ensembl
Mir-374-P2 chrX: 57550217-57550268 [-] UCSC Ensembl
Mir-421-P1-v1 chrX: 57590222-57590284 [-] UCSC Ensembl
Mir-421-P1-v2 chrX: 57590223-57590282 [-] UCSC Ensembl
Mir-374-P1 chrX: 57590394-57590445 [-] UCSC Ensembl
Precursor
(pre-Mir +30nt flank)
UGCUCUUCUGAAGAAAUCCUACUCGGAUGGAUAUAAUACAACCUGCUAAGUGUCCUAGCACUUAUCAGGUUGUAUUAUCAUUGUCCGUGGCUAUGGCUCUCGUCUACCAGAC
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Structure
        10            20        30        40        50     
UGCUCUUCUGAAGAAAUC----|   UC   UG AU             C      UC 
                      CUAC  GGA  G  AUAAUACAACCUG UAAGUG  C
                      GGUG  CCU  U  UAUUAUGUUGGAC AUUCAC  U
CAGACCAUCUGCUCUCGGUAUC^   --   GU AC             U      GA 
110       100        90          80        70        60
Deep sequencing
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3' NTU No
MotifsNo
Tissue expression
 +
An An An Bl Ce Co He Hi Hi Hy Ki Ki Li Lu Ov Sk Te Te
Mature sequence

Cfa-Mir-374-P2_5p

mirBase accessionMIMAT0006754
Sequence
0- AUAUAAUACAACCUGCUAAGUG -22
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Proposed targets TargetScanVert: cfa-miR-374b
miRDB: MIMAT0006754
Star sequence

Cfa-Mir-374-P2_3p*

mirBase accessionNone
Sequence
30- CUUAUCAGGUUGUAUUAUCAUU -52
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