MirGeneDB 3.0

MirGeneDB ID

Cfa-Mir-374-P1

Family name MIR-374 (all species)
Seed UAUAAUA
Species Dog (Canis familiaris)
MiRBase ID cfa-mir-374a
Paralogues Cfa-Mir-374-P2 
Orthologues Bta-Mir-374-P1  Cja-Mir-374-P1  Cpo-Mir-374-P1  Dno-Mir-374-P1  Eca-Mir-374-P1  Hsa-Mir-374-P1  Mml-Mir-374-P1  Mmr-Mir-374-P1  Ocu-Mir-374-P1  Pab-Mir-374-P1 
Node of Origin (locus) Eutheria
Node of Origin (family) Eutheria
Genome context
(canFam3_add)
chrX: 57590394-57590445 [-] UCSC Ensembl
Clustered miRNAs
(< 50kb from Mir-374-P1)
Mir-421-P2 chrX: 57550054-57550110 [-] UCSC Ensembl
Mir-374-P2 chrX: 57550217-57550268 [-] UCSC Ensembl
Mir-421-P1-v1 chrX: 57590222-57590284 [-] UCSC Ensembl
Mir-421-P1-v2 chrX: 57590223-57590282 [-] UCSC Ensembl
Mir-374-P1 chrX: 57590394-57590445 [-] UCSC Ensembl
Precursor
(pre-Mir +30nt flank)
GCCCUCUGGGAAGAAAUUUUACAUCGGCCAUUAUAAUACAACCUGAUAAGUGUUGUAGCACUUACCAGGUUGUAUUGUAAUUGUCUGUGUAUAUGCCUGUCUCCCUUCCUGU
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Structure
        10          20        30        40        50     
GCCCUCUGGGAAGAAAUUU--|    C   C                A      UU 
                     UACAU GGC AUUAUAAUACAACCUG UAAGUG  G
                     AUGUG CUG UAAUGUUAUGUUGGAC AUUCAC  U
UGUCCUUCCCUCUGUCCGUAU^    U   U                C      GA 
110       100        90        80        70        60
Deep sequencing
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3' NTU No
MotifsNo
Tissue expression
 +
An An An Bl Ce Co He Hi Hi Hy Ki Ki Li Lu Ov Sk Te Te
Mature sequence

Cfa-Mir-374-P1_5p

mirBase accessionMIMAT0006753
Sequence
0- UUAUAAUACAACCUGAUAAGUG -22
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Proposed targets TargetScanVert: cfa-miR-374a
miRDB: MIMAT0006753
Co-mature sequence

Cfa-Mir-374-P1_3p

mirBase accessionNone
Sequence
30- CUUACCAGGUUGUAUUGUAAUU -52
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