MirGeneDB ID | Pab-Mir-374-P1 |
---|---|
Family name | MIR-374 (all species) |
Seed | UAUAAUA |
Species | Sumatran orangutan (Pongo abelii) |
MiRBase ID | |
Paralogues | Pab-Mir-374-P2 |
Orthologues | Bta-Mir-374-P1 Cfa-Mir-374-P1 Cja-Mir-374-P1 Cpo-Mir-374-P1 Dno-Mir-374-P1 Eca-Mir-374-P1 Hsa-Mir-374-P1 Mml-Mir-374-P1 Mmr-Mir-374-P1 Ocu-Mir-374-P1 |
Node of Origin (locus) | Eutheria |
Node of Origin (family) | Eutheria |
Genome context (GCA_028885655.2_NHGRI_mPonAbe1-v2.0_traces) |
CM054702.2: 79203990-79204041 [-] UCSC Ensembl |
Precursor (pre-Mir +30nt flank) | ACCCCCUGGGAAGAAAUUUUACAUCGGCCAUUAUAAUACAACCUGAUAAGUGUUGUAGCACUUAUCAGAUUGUAUUGUAAUUGUCUGUGUAUAUGCCUGUCUCUCUUCCUGUGet precursor sequence |
Structure | 10 20 30 40 50 ACCCCCUGGGAAGAAAUUU--| C C C UU UACAU GGC AUUAUAAUACAA CUGAUAAGUG G AUGUG CUG UAAUGUUAUGUU GACUAUUCAC U UGUCCUUCUCUCUGUCCGUAU^ U U A GA 110 100 90 80 70 60 |
Deep sequencing | |
3' NTU | No |
Motifs | No |
Mature sequence | Pab-Mir-374-P1_5p |
mirBase accession | None |
Sequence |
0- UUAUAAUACAACCUGAUAAGUG -22
Get sequence
|
Co-mature sequence | Pab-Mir-374-P1_3p |
mirBase accession | None |
Sequence |
30- CUUAUCAGAUUGUAUUGUAAUU -52
Get sequence
|