| MirGeneDB ID | Pab-Mir-374-P1 |
|---|
| Family name |
MIR-374 (all species) |
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| Seed |
UAUAAUA |
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| Species |
Sumatran orangutan (Pongo abelii) |
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| MiRBase ID |
|
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| Paralogues |
Pab-Mir-374-P2
|
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| Orthologues |
Bta-Mir-374-P1
Cfa-Mir-374-P1
Cja-Mir-374-P1
Cpo-Mir-374-P1
Dno-Mir-374-P1
Eca-Mir-374-P1
Hsa-Mir-374-P1
Mml-Mir-374-P1
Mmr-Mir-374-P1
Ocu-Mir-374-P1
|
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| Node of Origin (locus) |
Eutheria
|
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| Node of Origin (family) |
Eutheria
|
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Genome context
(GCA_028885655.2_NHGRI_mPonAbe1-v2.0_traces) |
CM054702.2: 79203990-79204041 [-]
UCSC
Ensembl
|
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Precursor
(pre-Mir +30nt flank) |
ACCCCCUGGGAAGAAAUUUUACAUCGGCCAUUAUAAUACAACCUGAUAAGUGUUGUAGCACUUAUCAGAUUGUAUUGUAAUUGUCUGUGUAUAUGCCUGUCUCUCUUCCUGU
Get precursor sequence
|
|---|
| Structure | 10 20 30 40 50
ACCCCCUGGGAAGAAAUUU--| C C C UU
UACAU GGC AUUAUAAUACAA CUGAUAAGUG G
AUGUG CUG UAAUGUUAUGUU GACUAUUCAC U
UGUCCUUCUCUCUGUCCGUAU^ U U A GA
110 100 90 80 70 60 |
|---|
| Deep sequencing |
Go to detailed chart
|
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| 3' NTU |
No
|
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| Motifs | No |
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Tissue expression
|
|
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| Mature sequence |
Pab-Mir-374-P1_5p |
| mirBase accession | None |
|---|
| Sequence |
0- UUAUAAUACAACCUGAUAAGUG -22
Get sequence
|
|---|
| Co-mature sequence |
Pab-Mir-374-P1_3p |
| mirBase accession | None |
|---|
| Sequence |
30- CUUAUCAGAUUGUAUUGUAAUU -52
Get sequence
|
|---|
