| MirGeneDB ID | Cja-Mir-374-P1 |
|---|---|
| Family name | MIR-374 (all species) |
| Seed | UAUAAUA |
| Species | White-tufted-ear marmoset (Callithrix jacchus) |
| MiRBase ID | |
| Paralogues | Cja-Mir-374-P2 |
| Orthologues | Bta-Mir-374-P1 Cfa-Mir-374-P1 Cpo-Mir-374-P1 Dno-Mir-374-P1 Eca-Mir-374-P1 Hsa-Mir-374-P1 Mml-Mir-374-P1 Mmr-Mir-374-P1 Ocu-Mir-374-P1 Pab-Mir-374-P1 |
| Node of Origin (locus) | Eutheria |
| Node of Origin (family) | Eutheria |
| Genome context (GCA_011100555.2_mCalJa1.2.pat.X_genomic) |
CM021937.1: 68734873-68734924 [-] UCSC Ensembl |
| Precursor (pre-Mir +30nt flank) | AUCCCCUGGAAAGAAAUUUUACAUCGGCCAUUAUAAUACAACCUGAUAAGUGUUACAGCACUUAUCAGAUUGUAUUGUAAUUGUCUGUGUAUAUGCCUGUCUCUCUUCCUGUGet precursor sequence |
| Structure | 10 20 30 40 50 AUCCCCUGGAAAGAAAUUU--| C C C UU UACAU GGC AUUAUAAUACAA CUGAUAAGUG A AUGUG CUG UAAUGUUAUGUU GACUAUUCAC C UGUCCUUCUCUCUGUCCGUAU^ U U A GA 110 100 90 80 70 60 |
| Deep sequencing | |
| 3' NTU | Unknown |
| Motifs | No |
| Mature sequence | Cja-Mir-374-P1_5p |
| mirBase accession | None |
| Sequence |
0- UUAUAAUACAACCUGAUAAGUG -22
Get sequence
|
| Star sequence | Cja-Mir-374-P1_3p* (predicted) |
| mirBase accession | None |
| Sequence |
30- CUUAUCAGAUUGUAUUGUAAUU -52
Get sequence
|
