MirGeneDB 3.0

MirGeneDB ID

Bta-Mir-374-P1

Family name MIR-374 (all species)
Seed UAUAAUA
Species Cow (Bos taurus)
MiRBase ID bta-mir-374a
Paralogues Bta-Mir-374-P2 
Orthologues Cfa-Mir-374-P1  Cja-Mir-374-P1  Cpo-Mir-374-P1  Dno-Mir-374-P1  Eca-Mir-374-P1  Hsa-Mir-374-P1  Mml-Mir-374-P1  Mmr-Mir-374-P1  Ocu-Mir-374-P1  Pab-Mir-374-P1 
Node of Origin (locus) Eutheria
Node of Origin (family) Eutheria
Genome context
(GCF_002263795.1_ARS-UCD1.2_BTA)
NC_037357.1: 76853059-76853110 [+] UCSC Ensembl
Clustered miRNAs
(< 50kb from Mir-374-P1)
Mir-374-P1 NC_037357.1: 76853059-76853110 [+] UCSC Ensembl
Mir-421-P1-v1 NC_037357.1: 76853220-76853282 [+] UCSC Ensembl
Mir-421-P1-v2 NC_037357.1: 76853222-76853281 [+] UCSC Ensembl
Precursor
(pre-Mir +30nt flank)
GCCCCCUGGAAAUGAAUUUUACAUCGGCCAUUAUAAUACAACCUGAUAAGUGUUACAGCACUUAUCAGGUUGUAUUGUAAUUGUCUGUGUAUAUGCCUGUCUCCCUUCCUUU
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Structure
        10          20        30        40        50     
GCCCCCUGGAAAUGAAUUU--|    C   C                       UU 
                     UACAU GGC AUUAUAAUACAACCUGAUAAGUG  A
                     AUGUG CUG UAAUGUUAUGUUGGACUAUUCAC  C
UUUCCUUCCCUCUGUCCGUAU^    U   U                       GA 
110       100        90        80        70        60
Deep sequencing
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3' NTU No
MotifsNo
Tissue expression
 +
Ad Bo Br Ce Co Co De Fe He Hy Ir Ki La Lo Mi No Op Or Pe Re Su Te
Mature sequence

Bta-Mir-374-P1_5p

mirBase accessionMIMAT0004342
Sequence
0- UUAUAAUACAACCUGAUAAGUG -22
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Proposed targets TargetScanVert: bta-miR-374a
Co-mature sequence

Bta-Mir-374-P1_3p

mirBase accessionNone
Sequence
30- CUUAUCAGGUUGUAUUGUAAUU -52
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