MirGeneDB 3.0

MirGeneDB ID

Pab-Mir-374-P2

Family name MIR-374 (all species)
Seed UAUAAUA
Species Sumatran orangutan (Pongo abelii)
MiRBase ID
Paralogues Pab-Mir-374-P1 
Orthologues Bta-Mir-374-P2  Cfa-Mir-374-P2  Cja-Mir-374-P2  Eca-Mir-374-P2  Hsa-Mir-374-P2  Laf-Mir-374-P2  Mml-Mir-374-P2  Mmu-Mir-374-P2  Ocu-Mir-374-P2  Rno-Mir-374-P2 
Node of Origin (locus) Eutheria
Node of Origin (family) Eutheria
Genome context
(GCA_028885655.2_NHGRI_mPonAbe1-v2.0_traces)
CM054702.2: 79135458-79135509 [-] UCSC Ensembl
Precursor
(pre-Mir +30nt flank)
UGCUCCUAUGAAGAAAUCCUACUCGGAUGGAUAUAAUACAACCUGCUAAGUGUCCUAGCACUUAGCAGGUUGUAUUAUCAUUGUCCGUGUCUAUGGCUCUCGUCUACCAGAC
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Structure
        10        20          30        40        50     
UGCUCCUAUGAAGAAAUCCU--| U    UG AU                    UC 
                      AC CGGA  G  AUAAUACAACCUGCUAAGUG  C
                      UG GCCU  U  UAUUAUGUUGGACGAUUCAC  U
CAGACCAUCUGCUCUCGGUAUC^ U    GU AC                    GA 
110       100        90        80        70        60
Deep sequencing
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3' NTU No
MotifsNo
Tissue expression
 +
Br Br Li Li
Mature sequence

Pab-Mir-374-P2_5p

mirBase accessionNone
Sequence
0- AUAUAAUACAACCUGCUAAGUG -22
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Star sequence

Pab-Mir-374-P2_3p*

mirBase accessionNone
Sequence
30- CUUAGCAGGUUGUAUUAUCAUU -52
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