MirGeneDB 3.0
MirGeneDB ID

Lan-Mir-10-P1u

Family name MIR-10 (all species)
Seed ACCCUGU
Species Lingula (Lingula anatina)
MiRBase ID
Paralogues Lan-Mir-10-P1v  Lan-Mir-10-P2  Lan-Mir-10-P3  Lan-Mir-10-P4d  Lan-Mir-10-P4e 
Orthologues Aae-Mir-10-P1-v1  Aae-Mir-10-P1-v2  Adi-Mir-10  Aga-Mir-10-P1-v1  Aga-Mir-10-P1-v2  Agr-Mir-10-P1  Asp-Mir-10  Asu-Mir-10-P1  Bfl-Mir-10-P1-v1  Bfl-Mir-10-P1-v2  Bge-Mir-10-P1-v1  Bge-Mir-10-P1-v2  Bla-Mir-10-P1-v1  Bla-Mir-10-P1-v2  Cbr-Mir-10-P1  Cel-Mir-10-P1  Cte-Mir-10-P1  Dan-Mir-10-P1  Dgr-Mir-10-P1  Dlo-Mir-10-P1-v1  Dlo-Mir-10-P1-v2  Dma-Mir-10-P1-v1  Dma-Mir-10-P1-v2  Dme-Mir-10-P1  Dmo-Mir-10-P1  Dpu-Mir-10-P1-v1  Dpu-Mir-10-P1-v2  Dsi-Mir-10-P1  Dya-Mir-10-P1  Eba-Mir-10-P1  Efe-Mir-10-P1  Egr-Mir-10-P1  Gpa-Mir-10-P1  Gsp-Mir-10-P1  Hme-Mir-10-P1-v1  Hme-Mir-10-P1-v2  Hru-Mir-10-P1  Isc-Mir-10-P1-v1  Isc-Mir-10-P1-v2  Lgi-Mir-10-P1  Lhy-Mir-10-P1  Llo-Mir-10-P1  Mgi-Mir-10-P1  Mom-Mir-10-P1  Npo-Mir-10-P1  Nve-Mir-10  Ofu-Mir-10-P1  Pau-Mir-10-P1  Pca-Mir-10-P1  Pdu-Mir-10-P1  Pfl-Mir-10-P1  Pmi-Mir-10-P1  Pve-Mir-10-P1  Rph-Mir-10-P1  Sko-Mir-10-P1  Sma-Mir-10-P1  Snu-Mir-10-P1  Spu-Mir-10-P1  Tca-Mir-10-P1-v1  Tca-Mir-10-P1-v2  War-Mir-10-P1  Xbo-Mir-10-P1 
Node of Origin (locus) L. anatina
Node of Origin (family) Eumetazoa
Genome context
(LinAna_1.0)		 LFEI01000202: 129197-129254 [+] Ensembl
Precursor
(pre-Mir +30nt flank)
AAAAUCCCAGAUCCCACUCGGCACCAUUUCUACCCUGUAGAUCCGAAUUUGUAUGAUAUUUGAAUACAAAUUCGGUCUAUAGGAUUUCAUGUGGUGUAGGUAAUUCAGCAUUUACUAC
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Structure
        10        20         30         40        50         
AAAAUCCCAGAUCCCACUCG-       UUCUAC-|       U           UGAUA 
                     GCACCAU       CCUGUAGA CCGAAUUUGUA     \
                     UGUGGUG       GGAUAUCU GGCUUAAACAU     U
CAUCAUUUACGACUUAAUGGA       UACUUUA^       -           AAGUU 
      110       100        90        80         70        60
Deep sequencing
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3' NTU Unknown
MotifsCNNC at 3p(+17)
Tissue expression
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Mature sequence

Lan-Mir-10-P1u_5p
mirBase accessionNone
Sequence 
0- UACCCUGUAGAUCCGAAUUUGUA -23
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Star sequence

Lan-Mir-10-P1u_3p* (predicted)
mirBase accessionNone
Sequence 
36- CAAAUUCGGUCUAUAGGAUUUC -58
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