MirGeneDB 3.0
MirGeneDB ID

Llo-Mir-184-P35

Family name MIR-184 (all species)
Seed GGACGGA
Species Bootlace worm (Lineus longissimus)
MiRBase ID
Paralogues Llo-Mir-184-P32  Llo-Mir-184-P33  Llo-Mir-184-P34  Llo-Mir-184-P36  Llo-Mir-184-P37  Llo-Mir-184-P38  Llo-Mir-184-P39  Llo-Mir-184-P40 
Orthologues Aae-Mir-184  Aca-Mir-184  Aga-Mir-184  Agr-Mir-184  Ami-Mir-184  Asu-Mir-184  Bfl-Mir-184  Bge-Mir-184  Bko-Mir-184  Bla-Mir-184  Bpl-Mir-184  Bta-Mir-184  Cfa-Mir-184  Cin-Mir-184  Cja-Mir-184  Cli-Mir-184  Cmi-Mir-184  Cpi-Mir-184  Cpo-Mir-184  Dan-Mir-184  Dgr-Mir-184  Dlo-Mir-184  Dma-Mir-184  Dme-Mir-184  Dmo-Mir-184  Dno-Mir-184  Dpu-Mir-184  Dsi-Mir-184  Dya-Mir-184  Eba-Mir-184  Eca-Mir-184  Egr-Mir-184  Esc-Mir-184  Ete-Mir-184  Gga-Mir-184  Gja-Mir-184  Gpa-Mir-184  Gsa-Mir-184  Gsp-Mir-184  Hme-Mir-184  Hsa-Mir-184  Isc-Mir-184  Laf-Mir-184  Lan-Mir-184  Lch-Mir-184  Lhy-Mir-184  Loc-Mir-184  Mdo-Mir-184  Mml-Mir-184  Mmr-Mir-184  Mmu-Mir-184  Mom-Mir-184  Neu-Mir-184  Npo-Mir-184  Oan-Mir-184  Ocu-Mir-184  Ofu-Mir-184  Pab-Mir-184  Pau-Mir-184  Pbv-Mir-184  Pdu-Mir-184  Pfl-Mir-184  Pma-Mir-184  Pmi-Mir-184  Pve-Mir-184  Rno-Mir-184  Rph-Mir-184  Sha-Mir-184  Sko-Mir-184  Sne-Mir-184  Snu-Mir-184  Spt-Mir-184  Spu-Mir-184  Sto-Mir-184  Tca-Mir-184  Tgu-Mir-184  Tur-Mir-184  War-Mir-184  Xtr-Mir-184 
Node of Origin (locus) Lineidae
Node of Origin (family) Nephrozoa
Genome context
(GCA_910592395.2_tnLinLong1)		 OU343005.1: 16409941-16409997 [+] Ensembl
Precursor
(pre-Mir +30nt flank)
CACUCUUACUAAGAACAGUCUGCAUCCUCUCCUCUUCAUUUCUCCAUCGUGAGGCCUUCACUCUCGGGACGGAGAUCUGAUAAGGGCAGGAUCUGGAUACAUUCAACUCGUGCACUU
Get precursor sequence
Structure
        10          20        30        40        50        
CACUCUUACUAAGAACA--|    C     C    CU   UU     A  G   GGCCU 
                   GUCUG AUCCU UCCU  UCA  UCUCC UC UGA     \
                   UAGGU UAGGA GGGA  AGU  AGAGG AG GCU     U
UUCACGUGCUCAACUUACA^    C     C    AU   CU     C  G   CUCAC 
     110       100        90        80        70        60
Deep sequencing
Go to detailed chart
3' NTU No
MotifsCNNC at 3p(+17)
Tissue expression
-   +
No No No No No No
Star sequence

Llo-Mir-184-P35_5p* (predicted)
mirBase accessionNone
Sequence 
0- CCUCUUCAUUUCUCCAUCGUGA -22
Get sequence
Mature sequence

Llo-Mir-184-P35_3p
mirBase accessionNone
Sequence 
35- GGGACGGAGAUCUGAUAAGGGC -57
Get sequence