MirGeneDB 3.0

MirGeneDB ID

Tur-Mir-184

Family name

MIR-184 (all species)

Seed

Species

Two-spotted spider mite (Tetranychus urticae)

MiRBase ID

tur-mir-184

Paralogues

Orthologues

Aae-Mir-184 Aca-Mir-184 Aga-Mir-184 Agr-Mir-184 Ami-Mir-184 Asu-Mir-184 Ava-Mir-184-P41 Ava-Mir-184-P42 Bfl-Mir-184 Bge-Mir-184 Bko-Mir-184 Bla-Mir-184 Bpl-Mir-184 Bta-Mir-184 Cfa-Mir-184 Cin-Mir-184 Cja-Mir-184 Cli-Mir-184 Cmi-Mir-184 Cpi-Mir-184 Cpo-Mir-184 Csc-Mir-184-P24 Csc-Mir-184-P25 Cte-Mir-184-P16 Cte-Mir-184-P17 Dan-Mir-184 Dgr-Mir-184 Dlo-Mir-184 Dma-Mir-184 Dme-Mir-184 Dmo-Mir-184 Dno-Mir-184 Dpu-Mir-184 Dre-Mir-184-P1 Dre-Mir-184-P2 Dsi-Mir-184 Dya-Mir-184 Eba-Mir-184 Eca-Mir-184 Efe-Mir-184-o1 Efe-Mir-184-o2 Efe-Mir-184-o3 Efe-Mir-184-o4 Egr-Mir-184 Esc-Mir-184 Ete-Mir-184 Gga-Mir-184 Gja-Mir-184 Gmo-Mir-184-P1 Gmo-Mir-184-P2 Gpa-Mir-184 Gsa-Mir-184 Gsp-Mir-184 Hme-Mir-184 Hru-Mir-184-o5 Hru-Mir-184-o6 Hsa-Mir-184 Isc-Mir-184 Laf-Mir-184 Lan-Mir-184 Lch-Mir-184 Lgi-Mir-184-P5 Lgi-Mir-184-P6 Lhy-Mir-184 Llo-Mir-184-P32 Llo-Mir-184-P33 Llo-Mir-184-P34 Llo-Mir-184-P35 Llo-Mir-184-P36 Llo-Mir-184-P37 Llo-Mir-184-P38 Llo-Mir-184-P39 Llo-Mir-184-P40 Loc-Mir-184 Lpo-Mir-184-P18 Lpo-Mir-184-P19 Lpo-Mir-184-P20 Lpo-Mir-184-P21 Lpo-Mir-184-P22 Lpo-Mir-184-P23 Mal-Mir-184-P1 Mal-Mir-184-P2 Mdo-Mir-184 Mgi-Mir-184-P7 Mgi-Mir-184-P8a Mgi-Mir-184-P8b Mgi-Mir-184-P8c Mgi-Mir-184-P8d Mgi-Mir-184-P9 Mgi-Mir-184-P10 Mgi-Mir-184-P11 Mgi-Mir-184-P12 Mgi-Mir-184-P13a Mgi-Mir-184-P13b Mgi-Mir-184-P14 Mgi-Mir-184-P15a1 Mgi-Mir-184-P15a2 Mgi-Mir-184-P15a3 Mgi-Mir-184-P15a4 Mgi-Mir-184-P15a5 Mgi-Mir-184-P15a6 Mgi-Mir-184-P15a7 Mgi-Mir-184-P15b Mgi-Mir-184-P15c Mgi-Mir-184-P15d Mgi-Mir-184-P15e1 Mgi-Mir-184-P15e2 Mgi-Mir-184-P15e3 Mgi-Mir-184-P15f Mgi-Mir-184-P15g1 Mgi-Mir-184-P15g2 Mgi-Mir-184-P15g3 Mgi-Mir-184-P15h Mgi-Mir-184-P15i Mgi-Mir-184-P15j Mgi-Mir-184-P15k Mgi-Mir-184-P15l1 Mgi-Mir-184-P15l2 Mgi-Mir-184-P15m Mgi-Mir-184-P15n Mgi-Mir-184-P15o Mgi-Mir-184-P15p Mgi-Mir-184-P15q Mgi-Mir-184-P15r Mgi-Mir-184-P15s Mgi-Mir-184-P15t Mgi-Mir-184-P15u Mml-Mir-184 Mmr-Mir-184 Mmu-Mir-184 Mom-Mir-184 Neu-Mir-184 Npo-Mir-184 Oan-Mir-184 Obi-Mir-184-P26 Obi-Mir-184-P27 Ocu-Mir-184 Ofu-Mir-184 Ovu-Mir-184-P26 Ovu-Mir-184-P27 Pab-Mir-184 Pau-Mir-184 Pbv-Mir-184 Pca-Mir-184-P30 Pca-Mir-184-P31 Pcr-Mir-184-P43 Pcr-Mir-184-P44 Pcr-Mir-184-P45 Pdu-Mir-184 Pfl-Mir-184 Pma-Mir-184 Pmi-Mir-184 Pve-Mir-184 Rno-Mir-184 Rph-Mir-184 Sha-Mir-184 Sko-Mir-184 Sme-Mir-184-P28 Sme-Mir-184-P29 Sne-Mir-184 Snu-Mir-184 Spt-Mir-184 Spu-Mir-184 Sto-Mir-184 Tca-Mir-184 Tgu-Mir-184 Tni-Mir-184-P1 Tni-Mir-184-P2 War-Mir-184 Xla-Mir-184-P3 Xla-Mir-184-P4 Xtr-Mir-184

Node of Origin (locus)

Bilateria

Node of Origin (family)

Nephrozoa

Genome context
(GCA_000239435.1_ASM23943v1_genomic_TUR_traces)

HE587310.1: 1724590-1724655 [-] Ensembl

Precursor
(pre-Mir +30nt flank)

UCCAUUGACGGAUUAUGUGUUCCUUCAUCUCCUUAUCAUUUCCGCUGUCCAGACAGAUUAAUGUUAAAAUGACCUGGACGGAGAACUGAUAAGGGCAAGCAGGGACAGUUAAACAACAAUUAAGCC

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Structure

        10          20        30        40        50        60   
UCCAUUGACGGAUUAUG--|      UCAUC         U   CG        ACAGAUUAAU 
                   UGUUCCU     UCCUUAUCA UUC  CUGUCCAG          \
                   ACAGGGA     GGGAAUAGU AAG  GGCAGGUC          G
CCGAAUUAACAACAAAUUG^      CGAAC         C   A-        CAGUAAAAUU 
    120       110       100        90         80        70

Deep sequencing

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3' NTU

No

Motifs

CNNC at 3p(+17)

Tissue expression

-

+

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Star sequence

Tur-Mir-184_5p*

mirBase accession

Sequence

0- CCUUAUCAUUUCCGCUGUCCAGA -23

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Mature sequence

Tur-Mir-184_3p

mirBase accession

Sequence

44- UGGACGGAGAACUGAUAAGGGC -66

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