MirGeneDB 3.0

MirGeneDB ID

Dre-Mir-184-P1

Family name MIR-184 (all species)
Seed GGACGGA
Species Zebrafish (Danio rerio)
MiRBase ID dre-mir-184-1
Paralogues Dre-Mir-184-P2 
Orthologues Aae-Mir-184  Aca-Mir-184  Aga-Mir-184  Agr-Mir-184  Ami-Mir-184  Asu-Mir-184  Bfl-Mir-184  Bge-Mir-184  Bko-Mir-184  Bla-Mir-184  Bpl-Mir-184  Bta-Mir-184  Cfa-Mir-184  Cin-Mir-184  Cja-Mir-184  Cli-Mir-184  Cmi-Mir-184  Cpi-Mir-184  Cpo-Mir-184  Dan-Mir-184  Dgr-Mir-184  Dlo-Mir-184  Dma-Mir-184  Dme-Mir-184  Dmo-Mir-184  Dno-Mir-184  Dpu-Mir-184  Dsi-Mir-184  Dya-Mir-184  Eba-Mir-184  Eca-Mir-184  Efe-Mir-184-o1  Egr-Mir-184  Esc-Mir-184  Ete-Mir-184  Gga-Mir-184  Gja-Mir-184  Gmo-Mir-184-P1  Gpa-Mir-184  Gsa-Mir-184  Gsp-Mir-184  Hme-Mir-184  Hsa-Mir-184  Isc-Mir-184  Laf-Mir-184  Lan-Mir-184  Lch-Mir-184  Lhy-Mir-184  Loc-Mir-184  Mal-Mir-184-P1  Mdo-Mir-184  Mml-Mir-184  Mmr-Mir-184  Mmu-Mir-184  Mom-Mir-184  Neu-Mir-184  Npo-Mir-184  Oan-Mir-184  Ocu-Mir-184  Ofu-Mir-184  Pab-Mir-184  Pau-Mir-184  Pbv-Mir-184  Pdu-Mir-184  Pfl-Mir-184  Pma-Mir-184  Pmi-Mir-184  Pve-Mir-184  Rno-Mir-184  Rph-Mir-184  Sha-Mir-184  Sko-Mir-184  Sne-Mir-184  Snu-Mir-184  Spt-Mir-184  Spu-Mir-184  Sto-Mir-184  Tca-Mir-184  Tgu-Mir-184  Tni-Mir-184-P1  Tur-Mir-184  War-Mir-184  Xtr-Mir-184 
Node of Origin (locus) Clupeocephala
Node of Origin (family) Nephrozoa
Genome context
(danRer11)
chr18: 26203314-26203376 [-] UCSC Ensembl
Precursor
(pre-Mir +30nt flank)
GUGAGAAUUUGAUUUCAGUCGAACACGUCUCCUUAUCACUUUUCCAGCCCAGCUAUCCAUUUAGUAUUCGUUGGACGGAGAACUGAUAAGGGCAUGUGCCCGAUACUCCCUGCCAGUCCAUCU
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Structure
        10          20        30        40        50        60 
GUGAGAAUUUGAUUUCA--|   AA     C         C      AGC     UAUCCAU 
                   GUCG  CACGU UCCUUAUCA UUUUCC   CCAGC       U
                   UAGC  GUGUA GGGAAUAGU AAGAGG   GGUUG       U
UCUACCUGACCGUCCCUCA^   CC     C         C      CA-     CUUAUGA 
 120       110       100        90        80         70
Deep sequencing
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3' NTU No
MotifsCNNC at 3p(+17)
Tissue expression
 +
Br Br Em Ey Gu Gu He Li Li Ov Te
Star sequence

Dre-Mir-184-P1_5p*

mirBase accessionNone
Sequence
0- CCUUAUCACUUUUCCAGCCCAGC -23
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Mature sequence

Dre-Mir-184-P1_3p

mirBase accessionMIMAT0001853
Sequence
41- UGGACGGAGAACUGAUAAGGGC -63
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Proposed targets TargetScanFish: dre-miR-184