MirGeneDB 2.1

MirGeneDB ID

Tni-Mir-184-P1

Family name MIR-184 (all species)
Seed GGACGGA
Species Pufferfish (Tetraodon nigroviridis)
MiRBase ID
Paralogues Tni-Mir-184-P2 
Orthologues Aae-Mir-184  Aca-Mir-184  Ami-Mir-184  Asu-Mir-184  Bfl-Mir-184  Bge-Mir-184  Bla-Mir-184  Bpl-Mir-184  Bta-Mir-184  Cfa-Mir-184  Cin-Mir-184  Cli-Mir-184  Cmi-Mir-184  Cpi-Mir-184  Cpo-Mir-184  Dan-Mir-184  Dma-Mir-184  Dme-Mir-184  Dmo-Mir-184  Dno-Mir-184  Dpu-Mir-184  Dre-Mir-184-P1  Dsi-Mir-184  Dya-Mir-184  Efe-Mir-184-o1  Esc-Mir-184  Ete-Mir-184  Gga-Mir-184  Gja-Mir-184  Gmo-Mir-184-P1  Hme-Mir-184  Hsa-Mir-184  Isc-Mir-184  Lan-Mir-184  Lch-Mir-184  Loc-Mir-184  Mal-Mir-184-P1  Mdo-Mir-184  Mml-Mir-184  Mmu-Mir-184  Npo-Mir-184  Oan-Mir-184  Ocu-Mir-184  Pbv-Mir-184  Pfl-Mir-184  Pma-Mir-184  Pmi-Mir-184  Rno-Mir-184  Sha-Mir-184  Sko-Mir-184  Spt-Mir-184  Spu-Mir-184  Sto-Mir-184  Tca-Mir-184  Tgu-Mir-184  Xtr-Mir-184 
Node of Origin (locus) Clupeocephala
Node of Origin (family) Bilateria
Genome context
(Tetraodon_nigroviridis.TETRAODON8.dna.toplevel)
13: 2752851-2752914 [+] UCSC Ensembl
Precursor
(pre-Mir +30nt flank)
GUUCAGGUUGUAAUGUUGUCAAGCUCAUCUCCUUAUCACUUUUCCAGCCCAGCUAUCAAUUGAAAAAUGUGUUGGACGGAGAACUGAUAAGGGCUAUGUGUCUGACACUUUCCAUCACUGAUAA
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Structure
        10         20         30        40        50        60  
GUUCAGGUUGUAAUGUU-    AG U   C-|        C      AGC     UAUCAAUU 
                  GUCA  C CAU  UCCUUAUCA UUUUCC   CCAGC        \
                  CAGU  G GUA  GGGAAUAGU AAGAGG   GGUUG        G
AAUAGUCACUACCUUUCA    CU U   UC^        C      CA-     UGUAAAAA 
  120       110       100        90        80         70
Deep sequencing
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3' NTU No
MotifsUG at 5p(-14)
Tissue expression
 +
Sp Sp Sp To
Star sequence

Tni-Mir-184-P1_5p* (predicted)

mirBase accessionNone
Sequence
0- CCUUAUCACUUUUCCAGCCCAGC -23
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Mature sequence

Tni-Mir-184-P1_3p

mirBase accessionNone
Sequence
42- UGGACGGAGAACUGAUAAGGGC -64
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