MirGeneDB 3.0

MirGeneDB ID

Gga-Mir-184

Family name

MIR-184 (all species)

Seed

Species

Chicken (Gallus gallus)

MiRBase ID

gga-mir-184

Paralogues

Orthologues

Aae-Mir-184 Aca-Mir-184 Aga-Mir-184 Agr-Mir-184 Ami-Mir-184 Asu-Mir-184 Ava-Mir-184-P41 Ava-Mir-184-P42 Bfl-Mir-184 Bge-Mir-184 Bko-Mir-184 Bla-Mir-184 Bpl-Mir-184 Bta-Mir-184 Cfa-Mir-184 Cin-Mir-184 Cja-Mir-184 Cli-Mir-184 Cmi-Mir-184 Cpi-Mir-184 Cpo-Mir-184 Csc-Mir-184-P24 Csc-Mir-184-P25 Cte-Mir-184-P16 Cte-Mir-184-P17 Dan-Mir-184 Dgr-Mir-184 Dlo-Mir-184 Dma-Mir-184 Dme-Mir-184 Dmo-Mir-184 Dno-Mir-184 Dpu-Mir-184 Dre-Mir-184-P1 Dre-Mir-184-P2 Dsi-Mir-184 Dya-Mir-184 Eba-Mir-184 Eca-Mir-184 Efe-Mir-184-o1 Efe-Mir-184-o2 Efe-Mir-184-o3 Efe-Mir-184-o4 Egr-Mir-184 Esc-Mir-184 Ete-Mir-184 Gja-Mir-184 Gmo-Mir-184-P1 Gmo-Mir-184-P2 Gpa-Mir-184 Gsa-Mir-184 Gsp-Mir-184 Hme-Mir-184 Hru-Mir-184-o5 Hru-Mir-184-o6 Hsa-Mir-184 Isc-Mir-184 Laf-Mir-184 Lan-Mir-184 Lch-Mir-184 Lgi-Mir-184-P5 Lgi-Mir-184-P6 Lhy-Mir-184 Llo-Mir-184-P32 Llo-Mir-184-P33 Llo-Mir-184-P34 Llo-Mir-184-P35 Llo-Mir-184-P36 Llo-Mir-184-P37 Llo-Mir-184-P38 Llo-Mir-184-P39 Llo-Mir-184-P40 Loc-Mir-184 Lpo-Mir-184-P18 Lpo-Mir-184-P19 Lpo-Mir-184-P20 Lpo-Mir-184-P21 Lpo-Mir-184-P22 Lpo-Mir-184-P23 Mal-Mir-184-P1 Mal-Mir-184-P2 Mdo-Mir-184 Mgi-Mir-184-P7 Mgi-Mir-184-P8a Mgi-Mir-184-P8b Mgi-Mir-184-P8c Mgi-Mir-184-P8d Mgi-Mir-184-P9 Mgi-Mir-184-P10 Mgi-Mir-184-P11 Mgi-Mir-184-P12 Mgi-Mir-184-P13a Mgi-Mir-184-P13b Mgi-Mir-184-P14 Mgi-Mir-184-P15a1 Mgi-Mir-184-P15a2 Mgi-Mir-184-P15a3 Mgi-Mir-184-P15a4 Mgi-Mir-184-P15a5 Mgi-Mir-184-P15a6 Mgi-Mir-184-P15a7 Mgi-Mir-184-P15b Mgi-Mir-184-P15c Mgi-Mir-184-P15d Mgi-Mir-184-P15e1 Mgi-Mir-184-P15e2 Mgi-Mir-184-P15e3 Mgi-Mir-184-P15f Mgi-Mir-184-P15g1 Mgi-Mir-184-P15g2 Mgi-Mir-184-P15g3 Mgi-Mir-184-P15h Mgi-Mir-184-P15i Mgi-Mir-184-P15j Mgi-Mir-184-P15k Mgi-Mir-184-P15l1 Mgi-Mir-184-P15l2 Mgi-Mir-184-P15m Mgi-Mir-184-P15n Mgi-Mir-184-P15o Mgi-Mir-184-P15p Mgi-Mir-184-P15q Mgi-Mir-184-P15r Mgi-Mir-184-P15s Mgi-Mir-184-P15t Mgi-Mir-184-P15u Mml-Mir-184 Mmr-Mir-184 Mmu-Mir-184 Mom-Mir-184 Neu-Mir-184 Npo-Mir-184 Oan-Mir-184 Obi-Mir-184-P26 Obi-Mir-184-P27 Ocu-Mir-184 Ofu-Mir-184 Ovu-Mir-184-P26 Ovu-Mir-184-P27 Pab-Mir-184 Pau-Mir-184 Pbv-Mir-184 Pca-Mir-184-P30 Pca-Mir-184-P31 Pcr-Mir-184-P43 Pcr-Mir-184-P44 Pcr-Mir-184-P45 Pdu-Mir-184 Pfl-Mir-184 Pma-Mir-184 Pmi-Mir-184 Pve-Mir-184 Rno-Mir-184 Rph-Mir-184 Sha-Mir-184 Sko-Mir-184 Sme-Mir-184-P28 Sme-Mir-184-P29 Sne-Mir-184 Snu-Mir-184 Spt-Mir-184 Spu-Mir-184 Sto-Mir-184 Tca-Mir-184 Tgu-Mir-184 Tni-Mir-184-P1 Tni-Mir-184-P2 Tur-Mir-184 War-Mir-184 Xla-Mir-184-P3 Xla-Mir-184-P4 Xtr-Mir-184

Node of Origin (locus)

Nephrozoa

Node of Origin (family)

Nephrozoa

Genome context
(Gallus_gallus.GRCg6a)

10: 20409584-20409645 [+] UCSC Ensembl

Precursor
(pre-Mir +30nt flank)

GAGAAGGCGAUCCCGUGGCCGCUCUCACCCCCUUAUCACUUUUCCAGCCCAGCUUCUUCGCUCUGACUGUUGGACGGAGAACUGAUAAGGGUGUGCGGGUGGCACGAGCACCUGGCUGUGCC

Get precursor sequence

Structure

        10          20        30        40        50        60 
GAGAAGGCGAUCCCGUG--|      U   C         C      AGC     UUCUUCG 
                   GCCGCUC CAC CCCUUAUCA UUUUCC   CCAGC       \
                   CGGUGGG GUG GGGAAUAGU AAGAGG   GGUUG       C
CCGUGUCGGUCCACGAGCA^      C   U         C      CA-     UCAGUCU 
120       110       100        90        80         70

Deep sequencing

Go to detailed chart

3' NTU

No

Motifs

CNNC at 3p(+17)

Tissue expression

-

+

Ad	Ad	Ad	Br	Br	Ce	Ce	Ce	Ce	Gg	He	He	Hy	Hy	Ki	Ki	Li	Li	Lu	Lu	Ov	Pr	Pr	Sc	Sc	Sp	Sp	Te

Star sequence

Gga-Mir-184_5p*

mirBase accession

Sequence

0- CCUUAUCACUUUUCCAGCCCAGC -23

Get sequence

Proposed targets

TargetScanVert: gga-miR-184-5p
miRDB: MIMAT0026526

Mature sequence

Gga-Mir-184_3p

mirBase accession

Sequence

40- UGGACGGAGAACUGAUAAGGGU -62

Get sequence

Proposed targets

TargetScanVert: gga-miR-184-3p
miRDB: MIMAT0001158