MirGeneDB 3.0
MirGeneDB ID

Efe-Mir-184-o3

Family name MIR-184 (all species)
Seed GGACGGA
Species Common brandling worm (Eisenia fetida)
MiRBase ID
Paralogues Efe-Mir-184-o1  Efe-Mir-184-o2  Efe-Mir-184-o4 
Orthologues Aae-Mir-184  Aca-Mir-184  Aga-Mir-184  Agr-Mir-184  Ami-Mir-184  Asu-Mir-184  Bfl-Mir-184  Bge-Mir-184  Bko-Mir-184  Bla-Mir-184  Bpl-Mir-184  Bta-Mir-184  Cfa-Mir-184  Cin-Mir-184  Cja-Mir-184  Cli-Mir-184  Cmi-Mir-184  Cpi-Mir-184  Cpo-Mir-184  Dan-Mir-184  Dgr-Mir-184  Dlo-Mir-184  Dma-Mir-184  Dme-Mir-184  Dmo-Mir-184  Dno-Mir-184  Dpu-Mir-184  Dsi-Mir-184  Dya-Mir-184  Eba-Mir-184  Eca-Mir-184  Egr-Mir-184  Esc-Mir-184  Ete-Mir-184  Gga-Mir-184  Gja-Mir-184  Gpa-Mir-184  Gsa-Mir-184  Gsp-Mir-184  Hme-Mir-184  Hsa-Mir-184  Isc-Mir-184  Laf-Mir-184  Lan-Mir-184  Lch-Mir-184  Lhy-Mir-184  Loc-Mir-184  Mdo-Mir-184  Mml-Mir-184  Mmr-Mir-184  Mmu-Mir-184  Mom-Mir-184  Neu-Mir-184  Npo-Mir-184  Oan-Mir-184  Ocu-Mir-184  Ofu-Mir-184  Pab-Mir-184  Pau-Mir-184  Pbv-Mir-184  Pdu-Mir-184  Pfl-Mir-184  Pma-Mir-184  Pmi-Mir-184  Pve-Mir-184  Rno-Mir-184  Rph-Mir-184  Sha-Mir-184  Sko-Mir-184  Sne-Mir-184  Snu-Mir-184  Spt-Mir-184  Spu-Mir-184  Sto-Mir-184  Tca-Mir-184  Tgu-Mir-184  Tur-Mir-184  War-Mir-184  Xla-Mir-184-P3  Xtr-Mir-184 
Node of Origin (locus) E. fetida
Node of Origin (family) Nephrozoa
Genome context
(Efe_combined)		 Efet.01.634299: 361-419 [+]
Precursor
(pre-Mir +30nt flank)
CAUGGUCUACUAUUAGAACGCGCUACGUUUCCUUGUCACUUCUUCGUCACGUGUCACUCCUUACAACUGGACGGAGAACUGAUAAGGGGUUGUAGCAACAUUUCUUCAACAACCAAACA
Get precursor sequence
Structure
        10        20          30        40        50         
CAUGGUCUACUAUUAGAACGC--|     U          C         AC  GUCACU 
                       GCUACG UUCCUUGUCA UUCUUCGUC  GU      \
                       CGAUGU GGGGAAUAGU AAGAGGCAG  CA      C
ACAAACCAACAACUUCUUUACAA^     U          C         GU  ACAUUC 
       110       100        90        80        70        60
Deep sequencing
Go to detailed chart
3' NTU No
MotifsCNNC at 3p(+17)
Tissue expression
-   +
To
Star sequence

Efe-Mir-184-o3_5p* (predicted)
mirBase accessionNone
Sequence 
0- CCUUGUCACUUCUUCGUCACGU -22
Get sequence
Mature sequence

Efe-Mir-184-o3_3p
mirBase accessionNone
Sequence 
37- UGGACGGAGAACUGAUAAGGGG -59
Get sequence