MirGeneDB 3.0
MirGeneDB ID

Efe-Mir-184-o2

Family name MIR-184 (all species)
Seed GGACGGA
Species Common brandling worm (Eisenia fetida)
MiRBase ID
Paralogues Efe-Mir-184-o1  Efe-Mir-184-o3  Efe-Mir-184-o4 
Orthologues Aae-Mir-184  Aca-Mir-184  Aga-Mir-184  Agr-Mir-184  Ami-Mir-184  Asu-Mir-184  Bfl-Mir-184  Bge-Mir-184  Bko-Mir-184  Bla-Mir-184  Bpl-Mir-184  Bta-Mir-184  Cfa-Mir-184  Cin-Mir-184  Cja-Mir-184  Cli-Mir-184  Cmi-Mir-184  Cpi-Mir-184  Cpo-Mir-184  Dan-Mir-184  Dgr-Mir-184  Dlo-Mir-184  Dma-Mir-184  Dme-Mir-184  Dmo-Mir-184  Dno-Mir-184  Dpu-Mir-184  Dre-Mir-184-P2  Dsi-Mir-184  Dya-Mir-184  Eba-Mir-184  Eca-Mir-184  Egr-Mir-184  Esc-Mir-184  Ete-Mir-184  Gga-Mir-184  Gja-Mir-184  Gmo-Mir-184-P2  Gpa-Mir-184  Gsa-Mir-184  Gsp-Mir-184  Hme-Mir-184  Hsa-Mir-184  Isc-Mir-184  Laf-Mir-184  Lan-Mir-184  Lch-Mir-184  Lhy-Mir-184  Loc-Mir-184  Mal-Mir-184-P2  Mdo-Mir-184  Mml-Mir-184  Mmr-Mir-184  Mmu-Mir-184  Mom-Mir-184  Neu-Mir-184  Npo-Mir-184  Oan-Mir-184  Ocu-Mir-184  Ofu-Mir-184  Pab-Mir-184  Pau-Mir-184  Pbv-Mir-184  Pdu-Mir-184  Pfl-Mir-184  Pma-Mir-184  Pmi-Mir-184  Pve-Mir-184  Rno-Mir-184  Rph-Mir-184  Sha-Mir-184  Sko-Mir-184  Sne-Mir-184  Snu-Mir-184  Spt-Mir-184  Spu-Mir-184  Sto-Mir-184  Tca-Mir-184  Tgu-Mir-184  Tni-Mir-184-P2  Tur-Mir-184  War-Mir-184  Xtr-Mir-184 
Node of Origin (locus) E. fetida
Node of Origin (family) Nephrozoa
Genome context
(Efe_combined)		 Efet.01.63752: 518-578 [+]
Precursor
(pre-Mir +30nt flank)
GCCGACGAUGUCUUUGUUUGCGCCACGUUUCCUUAUCACUGAUCUGGUCCGGUGUGGCGAUUUAACAACUGGACGGAGAACUGAUAAGGGCAGGUGGUCACCGUUCCUCCAGGAAAAACUC
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Structure
        10           20        30        40        50        60
GCCGACGAUGUCUUUGUU---| C     GUU         CUGA    G      GUGGCG 
                     UG GCCAC   UCCUUAUCA    UCUG UCCGGU      A
                     AC UGGUG   GGGAAUAGU    AGGC AGGUCA      U
CUCAAAAAGGACCUCCUUGCC^ -     GAC         CAAG    -      ACAAUU 
 .       110       100         90        80         70
Deep sequencing
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3' NTU No
MotifsCNNC at 3p(+17), UGUG in loop
Tissue expression
-   +
To
Star sequence

Efe-Mir-184-o2_5p* (predicted)
mirBase accessionNone
Sequence 
0- CCUUAUCACUGAUCUGGUCCGGU -23
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Mature sequence

Efe-Mir-184-o2_3p
mirBase accessionNone
Sequence 
39- UGGACGGAGAACUGAUAAGGGC -61
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