Mir-184-P26

MirGeneDB ID

Obi-Mir-184-P26

Family name

MIR-184 (all species)

Seed

GGACGGA

Species

California two-spot octopus (Octopus bimaculoides)

MiRBase ID

Paralogues

Obi-Mir-184-P27

Orthologues

Aae-Mir-184 Aca-Mir-184 Aga-Mir-184 Agr-Mir-184 Ami-Mir-184 Asu-Mir-184 Bfl-Mir-184 Bge-Mir-184 Bko-Mir-184 Bla-Mir-184 Bpl-Mir-184 Bta-Mir-184 Cfa-Mir-184 Cin-Mir-184 Cja-Mir-184 Cli-Mir-184 Cmi-Mir-184 Cpi-Mir-184 Cpo-Mir-184 Dan-Mir-184 Dgr-Mir-184 Dlo-Mir-184 Dma-Mir-184 Dme-Mir-184 Dmo-Mir-184 Dno-Mir-184 Dpu-Mir-184 Dsi-Mir-184 Dya-Mir-184 Eba-Mir-184 Eca-Mir-184 Egr-Mir-184 Esc-Mir-184 Ete-Mir-184 Gga-Mir-184 Gja-Mir-184 Gpa-Mir-184 Gsa-Mir-184 Gsp-Mir-184 Hme-Mir-184 Hsa-Mir-184 Isc-Mir-184 Laf-Mir-184 Lan-Mir-184 Lch-Mir-184 Lhy-Mir-184 Loc-Mir-184 Mdo-Mir-184 Mml-Mir-184 Mmr-Mir-184 Mmu-Mir-184 Mom-Mir-184 Neu-Mir-184 Npo-Mir-184 Oan-Mir-184 Ocu-Mir-184 Ofu-Mir-184 Ovu-Mir-184-P26 Pab-Mir-184 Pau-Mir-184 Pbv-Mir-184 Pdu-Mir-184 Pfl-Mir-184 Pma-Mir-184 Pmi-Mir-184 Pve-Mir-184 Rno-Mir-184 Rph-Mir-184 Sha-Mir-184 Sko-Mir-184 Sne-Mir-184 Snu-Mir-184 Spt-Mir-184 Spu-Mir-184 Sto-Mir-184 Tca-Mir-184 Tgu-Mir-184 Tur-Mir-184 War-Mir-184 Xtr-Mir-184

Node of Origin (locus)

Octopus

Node of Origin (family)

Nephrozoa

Genome context
(PRJNA270931_OBI)

KQ416587: 107835-107892 [-] Ensembl

Precursor
(pre-Mir +30nt flank)

CAAAAGUAAAUUGUUUGCUGUCUUAUGAAUCCUUGUCACUUCUUCAUCUCGUCUAUACAAGAGUACUGGACGGAGAACUGAUAAGGGCUUGAAGGCAUAAAUACGUCUAUGCGAACCA

Get precursor sequence

Structure

        10           20        30        40        50        
CAAAAGUAAAUUGUUUGC---|     A   AU        C      A   C  CUAUA 
                     UGUCUU UGA  CCUUGUCA UUCUUC UCU GU     C
                     ACGGAA GUU  GGAAUAGU AAGAGG AGG CA     A
ACCAAGCGUAUCUGCAUAAAU^     -   CG        C      C   U  UGAGA 
      110       100         90        80        70        60

Deep sequencing

Go to detailed chart

3' NTU

Motifs

CNNC at 3p(+17)

Tissue expression

To

Star sequence

Obi-Mir-184-P26_5p*

mirBase accession

None

Sequence

0- CCUUGUCACUUCUUCAUCUCGU -22

Get sequence

Mature sequence

Obi-Mir-184-P26_3p

mirBase accession

None

Sequence

36- UGGACGGAGAACUGAUAAGGGC -58

Get sequence