MirGeneDB 3.0
MirGeneDB ID

Mdo-Mir-12358-v2

Family name MIR-12358 (all species)
Seed UACCGAU
Species Gray short-tailed opossum (Monodelphis domestica)
MiRBase ID mdo-mir-12358
Paralogues Mdo-Mir-12358-v1 
Orthologues Neu-Mir-12358-v2  Sha-Mir-12358-v2 
Node of Origin (locus) Marsupialia
Node of Origin (family) Marsupialia
Genome context
(monDom5_add)		 4: 395872533-395872595 [+] UCSC Ensembl
Clustered miRNAs
(< 50kb from Mir-12358-v2)		 Mir-12358-v2 4: 395872533-395872595 [+] UCSC Ensembl
Mir-12358-v1 4: 395872534-395872594 [+] UCSC Ensembl
Precursor
(pre-Mir +30nt flank)
UUGUGAGCUGCACCAACGGAGGGUGCACCCAUACCGAUGUGCUCUCAGAUCUAGUAUGUCAUGUUUUAAAGAUCUAUGAUUUCAUCGGUGUGAGUAUUCUCUCUACCAUCACCGGUUCCAACA
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Structure
        10            20        30        40        50        60 
UUGUGAGCUGCACCAAC----|        ACC          UGC  UC      AGUAUGUC 
                     GGAGGGUGC   CAUACCGAUG   UC  AGAUCU        \
                     UCUCUUAUG   GUGUGGCUAC   AG  UCUAGA        A
ACAACCUUGGCCACUACCAUC^        A--          UUU  UA      AAUUUUGU 
 120       110       100          90        80        70
Deep sequencing
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3' NTU No
MotifsCNNC at 3p(+17)
Tissue expression
-   +
Br Ce He Ki Te
Mature sequence

Mdo-Mir-12358-v2_5p
mirBase accessionMIMAT0050271
Sequence 
0- AUACCGAUGUGCUCUCAGAUCU -22
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Star sequence

Mdo-Mir-12358-v2_3p*
mirBase accessionMIMAT0050272
Sequence 
41- AUCUAUGAUUUCAUCGGUGUGA -63
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