MirGeneDB 3.0

MirGeneDB ID

Mdo-Mir-12472

Family name MIR-12472 (all species)
Seed CCCCCGG
Species Gray short-tailed opossum (Monodelphis domestica)
MiRBase ID
Paralogues
Orthologues Neu-Mir-12472  Sha-Mir-12472 
Node of Origin (locus) Marsupialia
Node of Origin (family) Marsupialia
Genome context
(monDom5_add)
Precursor
(pre-Mir +30nt flank)
GGAGGCCGAGCCGGGGGAGCGGCUCUCGUAGCUCCCCCGGGCUCCGGACCUCUCA
Get precursor sequence
Structure
            10         20     
--     -  -   -|         G  U 
  GGAGG CC GAG CCGGGGGAGC GC C
  UCUCC GG CUC GGCCCCCUCG UG U
AC     A  C   G^         A  C 
    50        40        30
Deep sequencing
3' NTU
MotifsNo
Star sequence

Mdo-Mir-12472_5p* (predicted)

mirBase accessionNone
Sequence
0- GGAGGCCGAGCCGGGGGAGC -20
Get sequence
Mature sequence

Mdo-Mir-12472_3p

mirBase accessionNone
Sequence
32- UCCCCCGGGCUCCGGACCUCUCA -55
Get sequence