Mir-7385-P2-v1

MirGeneDB ID

Mdo-Mir-7385-P2-v1

Family name

MIR-7385 (all species)

Seed

AACAUAG

Species

Gray short-tailed opossum (Monodelphis domestica)

MiRBase ID

mdo-mir-7385b

Paralogues

Mdo-Mir-7385-P1a Mdo-Mir-7385-P1b Mdo-Mir-7385-P1c Mdo-Mir-7385-P2-v2 Mdo-Mir-7385-P3 Mdo-Mir-7385-P4 Mdo-Mir-7385-P5a Mdo-Mir-7385-P5b Mdo-Mir-7385-P5c Mdo-Mir-7385-P6 Mdo-Mir-7385-P7 Mdo-Mir-7385-P8

Orthologues

Neu-Mir-7385-o2

Node of Origin (locus)

M. domestica

Node of Origin (family)

Marsupialia

Genome context
(monDom5_add)

X: 4610588-4610649 [+] UCSC Ensembl

Clustered miRNAs
(< 50kb from Mir-7385-P2-v1)

Mir-7385-P1a X: 4607962-4608023 [+] UCSC Ensembl
Mir-7385-P1b X: 4609054-4609115 [+] UCSC Ensembl
Mir-7385-P2-v1 X: 4610588-4610649 [+] UCSC Ensembl
Mir-7385-P2-v2 X: 4610588-4610649 [+] UCSC Ensembl
Mir-7385-P3 X: 4611475-4611536 [+] UCSC Ensembl
Mir-7385-P4 X: 4611934-4611995 [+] UCSC Ensembl
Mir-7385-P5a X: 4612215-4612273 [+] UCSC Ensembl
Mir-7385-P6 X: 4614575-4614633 [+] UCSC Ensembl
Mir-7385-P5b X: 4614848-4614909 [+] UCSC Ensembl
Mir-7385-P7 X: 4615421-4615479 [+] UCSC Ensembl
Mir-7385-P8 X: 4616510-4616572 [+] UCSC Ensembl
Mir-7385-P1c X: 4616788-4616846 [+] UCSC Ensembl
Mir-7385-P5c X: 4617777-4617835 [+] UCSC Ensembl

Precursor
(pre-Mir +30nt flank)

UUGAAGUAAUCAGUAUCCAAGGUCCCCUCUAGGUCUGACAGUCUAUCUUCCUAUGCUACUGUAAACCUUGGAACAUAGUCUAUCGGACCUGGAGGUGUCCUUUGGCCAUCAGCUCUCAUCAG

Get precursor sequence

Structure

        10          20        30        40        50        60
UUGAAGUAAUCAGUAUCC--|   UCC             C  U    C    UAUGCUAC 
                    AAGG   CCUCUAGGUCUGA AG CUAU UUCC        U
                    UUCC   GGAGGUCCAGGCU UC GAUA AAGG        G
GACUACUCUCGACUACCGGU^   UGU             A  U    C    UUCCAAAU 
120       110       100        90        80        70

Deep sequencing

Go to detailed chart

3' NTU

Motifs

CNNC at 3p(+17)

Tissue expression

Br	Ce	He	Ki	Te

Star sequence

Mdo-Mir-7385-P2-v1_5p*

mirBase accession

MIMAT0028828

Sequence

0- AGGUCUGACAGUCUAUCUUCCU -22

Get sequence

Proposed targets

TargetScanVert: mdo-miR-7385b-5p

Mature sequence

Mdo-Mir-7385-P2-v1_3p

mirBase accession

MIMAT0028829

Sequence

40- GAACAUAGUCUAUCGGACCUGG -62

Get sequence

Proposed targets

TargetScanVert: mdo-miR-7385b-3p