| MirGeneDB ID | Mml-Mir-556 |
|---|---|
| Family name | MIR-556 (all species) |
| Seed | AUGAACU |
| Species | Rhesus monkey (Macaca mulatta) |
| MiRBase ID | mml-mir-556 |
| Paralogues | |
| Orthologues | Cja-Mir-556-P1 Cja-Mir-556-P2 Hsa-Mir-556 Pab-Mir-556 |
| Node of Origin (locus) | Simiiformes |
| Node of Origin (family) | Simiiformes |
| Genome context (GCA_003339765.3_Mmul_10_traces) |
CM014336.1: 88633797-88633856 [-] UCSC Ensembl |
| Precursor (pre-Mir +30nt flank) | CUAGGAGUUCAUGAAGAUAGUAAUGAGAAAGAUGAACUCAUUGUAAUAUGAGCUUCAUUUAUGCAUUUCAUAUUACAAUUAGCUGAUCUUUUUUUUUUUUUUUUUUUUUUUACUACCUUCGet precursor sequence |
| Structure | 10 20 30 40 50 CUAGGAGUUCAUGAAGAUAGUAAU--| GAA C GCUUCAU GAGAAAGAU CU AUUGUAAUAUGA U UUUUUUCUA GA UAACAUUAUACU U CUUCCAUCAUUUUUUUUUUUUUUUUU^ GUC U UUACGUA . 110 100 90 80 70 60 |
| Deep sequencing | |
| Comment | This is a potential pseudogene. |
| 3' NTU | No |
| Motifs | No |
| Mature sequence | Mml-Mir-556_5p (predicted) |
| mirBase accession | MIMAT0006424 |
| Sequence |
0- GAUGAACUCAUUGUAAUAUGA -21
Get sequence
|
| Proposed targets |
TargetScanVert: mml-miR-556-5p |
| Co-mature sequence | Mml-Mir-556_3p (predicted) |
| mirBase accession | MIMAT0006425 |
| Sequence |
39- AUAUUACAAUUAGCUGAUCUU -60
Get sequence
|
| Proposed targets |
TargetScanVert: mml-miR-556-3p |
