MirGeneDB ID | Mml-Mir-652 |
Family name |
MIR-652 (all species) |
Seed |
AUGGCGC |
Species |
Rhesus monkey (Macaca mulatta) |
MiRBase ID |
mml-mir-652
|
Paralogues |
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Orthologues |
Bta-Mir-652
Cfa-Mir-652
Cja-Mir-652
Cpo-Mir-652
Dno-Mir-652
Eca-Mir-652
Ete-Mir-652
Hsa-Mir-652
Laf-Mir-652
Mmr-Mir-652
Mmu-Mir-652
Ocu-Mir-652
Pab-Mir-652
Rno-Mir-652
|
Node of Origin (locus) |
Eutheria
|
Node of Origin (family) |
Eutheria
|
Genome context (GCA_003339765.3_Mmul_10_traces) |
CM014356.1: 106807400-106807461 [+]
UCSC
Ensembl
|
Precursor (pre-Mir +30nt flank) |
GCAGGGCCGCCACGAAUGGCUAUGCACUGCACAACCCUAGGAGAGGGUGCCAUUCACAUAGACUAUAAUUGAAUGGCGCCACUAGGGUUGUGCAGUGCACAACCUGCACAACUGUACUCGGC
Get precursor sequence
|
Structure | 10 20 30 40 50 60
GCAGGGCCGCCACGAAU-| CUA GAGAG CACAUAGA
GG UGCACUGCACAACCCUAG GGUGCCAUU \
CC ACGUGACGUGUUGGGAUC CCGCGGUAA C
CGGCUCAUGUCAACACGU^ AAC A---- GUUAAUAU
120 110 100 90 80 70 |
Deep sequencing |
Go to detailed chart
|
3' NTU |
Yes
|
Motifs | UG at 5p(-14), CNNC at 3p(+17) |
Tissue expression
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Bo |
Br |
Br |
Br |
He |
Ki |
Li |
Lu |
Ly |
Sk |
Sp |
Te |
Th |
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Star sequence |
Mml-Mir-652_5p* |
mirBase accession | None |
Sequence |
0- ACAACCCUAGGAGAGGGUGCCAUU -24
Get sequence
|
Mature sequence |
Mml-Mir-652_3p |
mirBase accession | MIMAT0006493 |
Sequence |
41- AAUGGCGCCACUAGGGUUGUG -62
Get sequence
|
Proposed targets |
TargetScanVert: mml-miR-652
|