MirGeneDB 3.0
MirGeneDB ID

Mmu-Mir-335

Family name MIR-335 (all species)
Seed CAAGAGC
Species House mouse (Mus musculus)
MiRBase ID mmu-mir-335
Paralogues
Orthologues Bta-Mir-335  Cfa-Mir-335  Cja-Mir-335  Cpo-Mir-335  Dno-Mir-335  Eca-Mir-335  Ete-Mir-335  Hsa-Mir-335  Laf-Mir-335  Mml-Mir-335  Mmr-Mir-335  Ocu-Mir-335  Pab-Mir-335  Rno-Mir-335 
Node of Origin (locus) Eutheria
Node of Origin (family) Eutheria
Genome context
(mm10)		 chr6: 30741314-30741375 [+] UCSC Ensembl
Precursor
(pre-Mir +30nt flank)
AGAUUGGAAAAGAUUUCUUUUGGGCGGGGGUCAAGAGCAAUAACGAAAAAUGUUUGUUUUUCGUAAACCGUUUUUCAUUAUUGCUCCUGACCCCCUCUCAUGGGUUAUAGCCAGUCGAGUAA
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Structure
        10        20          30        40        50        60
AGAUUGGAAAAGAUUUCUUU--|   C        A         C        UUUGUUU 
                      UGGG GGGGGUCA GAGCAAUAA GAAAAAUG       U
                      ACUC CCCCCAGU CUCGUUAUU CUUUUUGC       U
AAUGAGCUGACCGAUAUUGGGU^   U        C         A        CAAAUGC 
120       110       100        90        80        70
Deep sequencing
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3' NTU No
MotifsNo
Tissue expression
-   +
Br Br Ce Ce Em Em He Ki Li Lu Ov Pa Sk Sp Te
Mature sequence

Mmu-Mir-335_5p
mirBase accessionMIMAT0000766
Sequence 
0- UCAAGAGCAAUAACGAAAAAUG -22
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Proposed targets microrna.org: MIMAT0000766
TargetScanVert: mmu-miR-335-5p
miRDB: MIMAT0000766
Star sequence

Mmu-Mir-335_3p*
mirBase accessionMIMAT0004704
Sequence 
40- UUUUUCAUUAUUGCUCCUGACC -62
Get sequence
Proposed targets microrna.org: MIMAT0004704
TargetScanVert: mmu-miR-335-3p
miRDB: MIMAT0004704