MirGeneDB 3.0
MirGeneDB ID

Cpo-Mir-335

Family name MIR-335 (all species)
Seed UUUUCAU
Species Guinea pig (Cavia porcellus)
MiRBase ID cpo-mir-335
Paralogues
Orthologues Bta-Mir-335  Cfa-Mir-335  Cja-Mir-335  Dno-Mir-335  Eca-Mir-335  Ete-Mir-335  Hsa-Mir-335  Laf-Mir-335  Mml-Mir-335  Mmr-Mir-335  Mmu-Mir-335  Ocu-Mir-335  Pab-Mir-335  Rno-Mir-335 
Node of Origin (locus) Eutheria
Node of Origin (family) Eutheria
Genome context
(cavPor3)		 scaffold_11: 50759609-50759666 [+] UCSC
Precursor
(pre-Mir +30nt flank)
AGACUGGAAAAGAUUUCUUUUGGGCGGGGGUCAAGAGCAAUAACGAAAAAUGUUUGUCAUAAACCGUUUUUCAUUAUUGCUCCUGACCUCCUCUCAUUUGCUAUAUCCAAUUAAGUGU
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Structure
        10        20          30        40        50        
AGACUGGAAAAGAUUUCUUU--|   C        A         C        UUUGU 
                      UGGG GGGGGUCA GAGCAAUAA GAAAAAUG     C
                      ACUC CCUCCAGU CUCGUUAUU CUUUUUGC     A
UGUGAAUUAACCUAUAUCGUUU^   U        C         A        CAAAU 
      110       100        90        80        70        60
Deep sequencing
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3' NTU No
MotifsNo
Tissue expression
-   +
Bl Bl Bl Bl Oo Oo Oo Oo To Wh
Star sequence

Cpo-Mir-335_5p*
mirBase accessionMIMAT0047170
Sequence 
0- UCAAGAGCAAUAACGAAAAAUG -22
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Mature sequence

Cpo-Mir-335_3p
mirBase accessionMIMAT0047171
Sequence 
36- UUUUUCAUUAUUGCUCCUGACC -58
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