MirGeneDB 3.0
MirGeneDB ID

Laf-Mir-335

Family name MIR-335 (all species)
Seed CAAGAGC
Species African bush elephant (Loxodonta africana)
MiRBase ID
Paralogues
Orthologues Bta-Mir-335  Cfa-Mir-335  Cja-Mir-335  Cpo-Mir-335  Dno-Mir-335  Eca-Mir-335  Ete-Mir-335  Hsa-Mir-335  Mml-Mir-335  Mmr-Mir-335  Mmu-Mir-335  Ocu-Mir-335  Pab-Mir-335  Rno-Mir-335 
Node of Origin (locus) Eutheria
Node of Origin (family) Eutheria
Genome context
(GCA_000001905.1_Loxafr3.0)		 GL010032.1: 99864025-99864082 [+] UCSC Ensembl
Precursor
(pre-Mir +30nt flank)
GGACUGGAAAAGACUUCUUUUGGGCGGGGGUCAAGAGCAAUAACGGAGAAUGUCUGUGAUGAACCAUUUUUCAUUAUUGCUCCUGACCUCCUCUCAUUUGCUCCCCGCGGCUGCGUGA
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Structure
        10        20          30        40        50        
GGACUGGAAAAGACUUCUUU--|   C        A         C        UCUGU 
                      UGGG GGGGGUCA GAGCAAUAA GGAGAAUG     G
                      ACUC CCUCCAGU CUCGUUAUU CUUUUUAC     A
AGUGCGUCGGCGCCCCUCGUUU^   U        C         A        CAAGU 
      110       100        90        80        70        60
Deep sequencing
3' NTU Unknown
MotifsCNNC at 3p(+17)
Tissue expression
-   +
Wh
Mature sequence

Laf-Mir-335_5p (predicted)
mirBase accessionNone
Sequence 
0- UCAAGAGCAAUAACGGAGAAUG -22
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Star sequence

Laf-Mir-335_3p* (predicted)
mirBase accessionNone
Sequence 
36- UUUUUCAUUAUUGCUCCUGACC -58
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