MirGeneDB ID | Mml-Mir-335 |
Family name |
MIR-335 (all species) |
Seed |
CAAGAGC |
Species |
Rhesus monkey (Macaca mulatta) |
MiRBase ID |
mml-mir-335
|
Paralogues |
|
Orthologues |
Bta-Mir-335
Cfa-Mir-335
Cja-Mir-335
Cpo-Mir-335
Dno-Mir-335
Eca-Mir-335
Ete-Mir-335
Hsa-Mir-335
Laf-Mir-335
Mmr-Mir-335
Mmu-Mir-335
Ocu-Mir-335
Pab-Mir-335
Rno-Mir-335
|
Node of Origin (locus) |
Eutheria
|
Node of Origin (family) |
Eutheria
|
Genome context (GCA_003339765.3_Mmul_10_traces) |
CM014338.1: 156796367-156796424 [+]
UCSC
Ensembl
|
Precursor (pre-Mir +30nt flank) |
AGAUUGGAAAUGAUUUAUUUUGAGCGGGGGUCAAGAGCAAUAACGAAAAAUGUUUGUCAUAAACCGUUUUUCAUUAUUGCUCCUGACCUCCUCUCAUUUGCUAUAUUCAAUUAAGUAA
Get precursor sequence
|
Structure | 10 20 30 40 50
AGAUUGGAAAUGAUUUAUUU--| C A C UUUGU
UGAG GGGGGUCA GAGCAAUAA GAAAAAUG C
ACUC CCUCCAGU CUCGUUAUU CUUUUUGC A
AAUGAAUUAACUUAUAUCGUUU^ U C A CAAAU
110 100 90 80 70 60 |
Deep sequencing |
Go to detailed chart
|
3' NTU |
No
|
Motifs | No |
Tissue expression
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Bo |
Br |
Br |
Br |
He |
Ki |
Li |
Lu |
Ly |
Sk |
Sp |
Te |
Th |
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Mature sequence |
Mml-Mir-335_5p |
mirBase accession | MIMAT0006274 |
Sequence |
0- UCAAGAGCAAUAACGAAAAAUG -22
Get sequence
|
Proposed targets |
TargetScanVert: mml-miR-335-5p
|
Star sequence |
Mml-Mir-335_3p* |
mirBase accession | MIMAT0026853 |
Sequence |
36- UUUUUCAUUAUUGCUCCUGACC -58
Get sequence
|
Proposed targets |
TargetScanVert: mml-miR-335-3p
|