MirGeneDB 3.0

MirGeneDB ID

Mmr-Mir-335

Family name MIR-335 (all species)
Seed UUUUCAU
Species Gray mouse lemur (Microcebus murinus)
MiRBase ID
Paralogues
Orthologues Bta-Mir-335  Cfa-Mir-335  Cja-Mir-335  Cpo-Mir-335  Dno-Mir-335  Eca-Mir-335  Ete-Mir-335  Hsa-Mir-335  Laf-Mir-335  Mml-Mir-335  Mmu-Mir-335  Ocu-Mir-335  Pab-Mir-335  Rno-Mir-335 
Node of Origin (locus) Eutheria
Node of Origin (family) Eutheria
Genome context
(GCA_000165445.3_Mmur_3.0_genomic)
CM007671.1: 21016516-21016573 [-] UCSC Ensembl
Precursor
(pre-Mir +30nt flank)
AGAUUGGAAAAGAUUUCUUUUGGGCGGGGGUCAAGAGCAAUAACGAAAAAUGUUUGUCAUAAACCGUUUUUCAUUAUUGCUCCUGACCUCCUCUCAUUUGCUAUAUUCAGUUAAGUAA
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Structure
        10        20          30        40        50        
AGAUUGGAAAAGAUUUCUUU--|   C        A         C        UUUGU 
                      UGGG GGGGGUCA GAGCAAUAA GAAAAAUG     C
                      ACUC CCUCCAGU CUCGUUAUU CUUUUUGC     A
AAUGAAUUGACUUAUAUCGUUU^   U        C         A        CAAAU 
      110       100        90        80        70        60
Deep sequencing
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3' NTU No
MotifsNo
Tissue expression
 +
Mu Mu Mu Mu Mu Mu Mu Mu
Star sequence

Mmr-Mir-335_5p*

mirBase accessionNone
Sequence
0- UCAAGAGCAAUAACGAAAAAUG -22
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Mature sequence

Mmr-Mir-335_3p

mirBase accessionNone
Sequence
36- UUUUUCAUUAUUGCUCCUGACC -58
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