| MirGeneDB ID | Mom-Mir-12590 |
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| Family name |
MIR-12590 (all species) |
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| Seed |
CUGGCGG |
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| Species |
Mossy chiton (Mopalia muscosa) |
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| MiRBase ID |
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| Paralogues |
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| Orthologues |
Agr-Mir-12590
Eba-Mir-12590
War-Mir-12590-P1a
War-Mir-12590-P1b
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| Node of Origin (locus) |
Aculifera
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| Node of Origin (family) |
Aculifera
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Genome context
(GCA_031763545.1_ASM3176354v1_genomic_Mom) |
JARFOD010108965.1: 10420-10478 [+]
Ensembl
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Precursor
(pre-Mir +30nt flank) |
AUGGAUCAUGUGUGUUGUCGGAUUGCGUGUCCCUUCCUCCGCCCGUUAGAUGGCCUAGUUCAUUGCUUCUGGCGGGCGAAGAAAGAGGCGGGCAUCCAUCACUUUCAACCAAAGCCACA
Get precursor sequence
|
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| Structure | 10 20 30 40 50
AUGGAUCAUGUGUGUUGUC---| U G C C C UGGCCUAG
GGAU GC UGUC CUU CU CGCCCGUUAGA \
CCUA CG GCGG GAA GA GCGGGCGGUCU U
ACACCGAAACCAACUUUCACUA^ - G A A A UCGUUACU
110 100 90 80 70 60 |
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| Deep sequencing |
Go to detailed chart
|
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| 3' NTU |
No
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| Motifs | CNNC at 3p(+17) |
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Tissue expression
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| Star sequence |
Mom-Mir-12590_5p* (predicted) |
| mirBase accession | None |
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| Sequence |
0- CCCUUCCUCCGCCCGUUAGAUG -22
Get sequence
|
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| Mature sequence |
Mom-Mir-12590_3p |
| mirBase accession | None |
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| Sequence |
37- UCUGGCGGGCGAAGAAAGAGGC -59
Get sequence
|
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