| MirGeneDB ID | War-Mir-12590-P1b |
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| Family name |
MIR-12590 (all species) |
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| Seed |
CUGGCGG |
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| Species |
Wirenia (Solenogaster) (Wirenia argentea) |
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| MiRBase ID |
|
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| Paralogues |
War-Mir-12590-P1a
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| Orthologues |
Agr-Mir-12590
Eba-Mir-12590
Mom-Mir-12590
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| Node of Origin (locus) |
W. argentea
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| Node of Origin (family) |
Aculifera
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Genome context
(GCA_025802215.1_ASM2580221v1_Wirenia) |
WNLI01159055.1: 2682-2742 [+]
Ensembl
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Precursor
(pre-Mir +30nt flank) |
UGGACCUUGUGAAGGUAGACAAUCGCCCGGCCCUUUCUCCCUUCGCCAGGUGGUGUUUUUGUGAAUUCUUCUGGCGGGCGAAGAAAGAGGCGGGCGUUCUGUCAGAUUCGUCAUCCUGUUC
Get precursor sequence
|
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| Structure | 10 20 30 40 50
UGGACCUUGUGAAGGUA- AU- G - - -| UU U UGUUUU
GACA CGCCC GCC CUUUC UC CC CGCCAGG GG \
CUGU GCGGG CGG GAAAG AG GG GCGGUCU CU U
CUUGUCCUACUGCUUAGA CUU - A A C^ -- U UAAGUG
. 110 100 90 80 70 |
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| Deep sequencing |
Go to detailed chart
|
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| 3' NTU |
No
|
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| Motifs | CNNC at 3p(+17), UGUG in loop |
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Tissue expression
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| Star sequence |
War-Mir-12590-P1b_5p* (predicted) |
| mirBase accession | None |
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| Sequence |
0- CCCUUUCUCCCUUCGCCAGGUGG -23
Get sequence
|
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| Mature sequence |
War-Mir-12590-P1b_3p |
| mirBase accession | None |
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| Sequence |
39- UCUGGCGGGCGAAGAAAGAGGC -61
Get sequence
|
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