MirGeneDB 3.0
MirGeneDB ID

Ocu-Mir-12092

Family name MIR-12092 (all species)
Seed CUAGCCG
Species Rabbit (Oryctolagus cuniculus)
MiRBase ID ocu-mir-12092
Paralogues
Orthologues
Node of Origin (locus) O. cuniculus
Node of Origin (family) O. cuniculus
Genome context
(oryCun2_add)		 chrX: 108854560-108854616 [-] UCSC Ensembl
Clustered miRNAs
(< 50kb from Mir-12092)		 Mir-450-P3 chrX: 108850008-108850065 [-] UCSC Ensembl
Mir-450-P2 chrX: 108850173-108850229 [-] UCSC Ensembl
Mir-450-P1 chrX: 108850343-108850399 [-] UCSC Ensembl
Mir-542-v1 chrX: 108850875-108850933 [-] UCSC Ensembl
Mir-542-v2 chrX: 108850876-108850932 [-] UCSC Ensembl
Mir-12092 chrX: 108854560-108854616 [-] UCSC Ensembl
Mir-15-P2c chrX: 108855773-108855835 [-] UCSC Ensembl
Mir-15-P1c chrX: 108856105-108856163 [-] UCSC Ensembl
Precursor
(pre-Mir +30nt flank)
CCCCCAGAAGAGUUCCAGUUUGGGGAGGCCUGGAGUUCCGGGUAGUCCAGAGCCGGGAGUCAGGCUCUAGCCGCCCGAAACACCCGCUCUCCCAGACUCCCUUGCGCCUGGGCAGUG
Get precursor sequence
Structure
        10           20        30        40        50        
CCCCCAGAAGAGUUCCA---|      GA   CU  A   C    UA  CC     CGGG 
                    GUUUGGG  GGC  GG GUU CGGG  GU  AGAGC    A
                    CAGACCC  UCG  CC CAA GCCC  CG  UCUCG    G
GUGACGGGUCCGCGUUCCCU^      UC   C-  A   A    GC  A-     GACU 
     110       100        90         80        70         60
Deep sequencing
Go to detailed chart
3' NTU No
MotifsCNNC at 3p(+17)
Tissue expression
-   +
He Ki Te To Wh
Star sequence

Ocu-Mir-12092_5p*
mirBase accessionMIMAT0048623
Sequence 
0- UGGAGUUCCGGGUAGUCCAGAGC -23
Get sequence
Mature sequence

Ocu-Mir-12092_3p
mirBase accessionMIMAT0048624
Sequence 
35- UCUAGCCGCCCGAAACACCCGC -57
Get sequence