MirGeneDB 3.0
MirGeneDB ID

Ocu-Mir-450-P2

Family name MIR-450 (all species)
Seed UUUGCGA
Species Rabbit (Oryctolagus cuniculus)
MiRBase ID ocu-mir-450a-1
Paralogues Ocu-Mir-450-P1  Ocu-Mir-450-P3 
Orthologues Bta-Mir-450-P2  Cfa-Mir-450-P2  Cja-Mir-450-P2  Cpo-Mir-450-P2  Dno-Mir-450-P2  Eca-Mir-450-P2  Hsa-Mir-450-P2  Laf-Mir-450-P2  Mml-Mir-450-P2  Mmr-Mir-450-P2  Mmu-Mir-450-P2  Pab-Mir-450-P2  Rno-Mir-450-P2a  Rno-Mir-450-P2b 
Node of Origin (locus) Eutheria
Node of Origin (family) Eutheria
Genome context
(oryCun2_add)		 chrX: 108850173-108850229 [-] UCSC Ensembl
Clustered miRNAs
(< 50kb from Mir-450-P2)		 Mir-450-P3 chrX: 108850008-108850065 [-] UCSC Ensembl
Mir-450-P2 chrX: 108850173-108850229 [-] UCSC Ensembl
Mir-450-P1 chrX: 108850343-108850399 [-] UCSC Ensembl
Mir-542-v1 chrX: 108850875-108850933 [-] UCSC Ensembl
Mir-542-v2 chrX: 108850876-108850932 [-] UCSC Ensembl
Mir-12092 chrX: 108854560-108854616 [-] UCSC Ensembl
Mir-15-P2c chrX: 108855773-108855835 [-] UCSC Ensembl
Mir-15-P1c chrX: 108856105-108856163 [-] UCSC Ensembl
Precursor
(pre-Mir +30nt flank)
GUAGGAGAUCAAAGAAAGAUGCUAAACUGUUUUUGCGAUGUGUUCCUAAUAUGCACUAUAAUUAUAUUGGGAACAUUUUGCAUGCAUAGUUUUGUAUCAAUAUACAGACAGAAGGAU
Get precursor sequence
Structure
        10          20        30        40        50        
GUAGGAGAUCAAAGAAA--|    U       UUU     U             GCACU 
                   GAUGC AAACUGU   UGCGA GUGUUCCUAAUAU     \
                   CUAUG UUUGAUA   ACGUU UACAAGGGUUAUA     A
UAGGAAGACAGACAUAUAA^    U       CGU     U             UUAAU 
     110       100        90        80        70        60
Deep sequencing
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CommentThere is a second Dicer cut -1 on both arms.
3' NTU No
MotifsNo
Tissue expression
-   +
He Ki Te To Wh
Mature sequence

Ocu-Mir-450-P2_5p
mirBase accessionMIMAT0048457
Sequence 
0- UUUUGCGAUGUGUUCCUAAUAU -22
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Star sequence

Ocu-Mir-450-P2_3p*
mirBase accessionMIMAT0048458
Sequence 
35- AUUGGGAACAUUUUGCAUGCAU -57
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