MirGeneDB 3.0
MirGeneDB ID

Cpo-Mir-450-P2

Family name MIR-450 (all species)
Seed UUUGCGA
Species Guinea pig (Cavia porcellus)
MiRBase ID cpo-mir-450a-1
Paralogues Cpo-Mir-450-P1  Cpo-Mir-450-P3 
Orthologues Bta-Mir-450-P2  Cfa-Mir-450-P2  Cja-Mir-450-P2  Dno-Mir-450-P2  Eca-Mir-450-P2  Hsa-Mir-450-P2  Laf-Mir-450-P2  Mml-Mir-450-P2  Mmr-Mir-450-P2  Mmu-Mir-450-P2  Ocu-Mir-450-P2  Pab-Mir-450-P2  Rno-Mir-450-P2a  Rno-Mir-450-P2b 
Node of Origin (locus) Eutheria
Node of Origin (family) Eutheria
Genome context
(cavPor3)		 scaffold_128: 2873103-2873159 [-] UCSC
Clustered miRNAs
(< 50kb from Mir-450-P2)		 Mir-450-P3 scaffold_128: 2872948-2873006 [-] UCSC
Mir-450-P2 scaffold_128: 2873103-2873159 [-] UCSC
Mir-450-P1 scaffold_128: 2873272-2873328 [-] UCSC
Mir-542 scaffold_128: 2874159-2874217 [-] UCSC
Mir-15-P2c scaffold_128: 2878959-2879021 [-] UCSC
Mir-15-P1c scaffold_128: 2879319-2879377 [-] UCSC
Precursor
(pre-Mir +30nt flank)
AUAAGUGAUUGAAGAAAGAUGCUAAACUGUUUUUGCGAUGUGUUCCUAAUAUGUACUAUAAAUAUAUUGGGAGCAUUUUGCAUGCAUAGUUUUGCAUCAAUAUACAGACAAAAAGAU
Get precursor sequence
Structure
        10          20        30        40        50        
AUAAGUGAUUGAAGAAA--|    U       UUU     U             GUACU 
                   GAUGC AAACUGU   UGCGA GUGUUCCUAAUAU     \
                   CUACG UUUGAUA   ACGUU UACGAGGGUUAUA     A
UAGAAAAACAGACAUAUAA^    U       CGU     U             UAAAU 
     110       100        90        80        70        60
Deep sequencing
Go to detailed chart
3' NTU Unknown
MotifsNo
Tissue expression
-   +
Bl Bl Bl Bl Oo Oo Oo Oo To Wh
Mature sequence

Cpo-Mir-450-P2_5p
mirBase accessionMIMAT0047261
Sequence 
0- UUUUGCGAUGUGUUCCUAAUAU -22
Get sequence
Star sequence

Cpo-Mir-450-P2_3p* (predicted)
mirBase accessionMIMAT0047262
Sequence 
35- AUUGGGAGCAUUUUGCAUGCAU -57
Get sequence