MirGeneDB 3.0
MirGeneDB ID

Cpo-Mir-450-P3

Family name MIR-450 (all species)
Seed UUUGCAA
Species Guinea pig (Cavia porcellus)
MiRBase ID cpo-mir-450b
Paralogues Cpo-Mir-450-P1  Cpo-Mir-450-P2 
Orthologues Bta-Mir-450-P3  Cfa-Mir-450-P3  Cja-Mir-450-P3  Dno-Mir-450-P3  Eca-Mir-450-P3  Hsa-Mir-450-P3  Laf-Mir-450-P3  Mml-Mir-450-P3  Mmr-Mir-450-P3  Mmu-Mir-450-P3  Ocu-Mir-450-P3  Pab-Mir-450-P3  Rno-Mir-450-P3a  Rno-Mir-450-P3b 
Node of Origin (locus) Eutheria
Node of Origin (family) Eutheria
Genome context
(cavPor3)		 scaffold_128: 2872948-2873006 [-] UCSC
Clustered miRNAs
(< 50kb from Mir-450-P3)		 Mir-450-P3 scaffold_128: 2872948-2873006 [-] UCSC
Mir-450-P2 scaffold_128: 2873103-2873159 [-] UCSC
Mir-450-P1 scaffold_128: 2873272-2873328 [-] UCSC
Mir-542 scaffold_128: 2874159-2874217 [-] UCSC
Mir-15-P2c scaffold_128: 2878959-2879021 [-] UCSC
Mir-15-P1c scaffold_128: 2879319-2879377 [-] UCSC
Precursor
(pre-Mir +30nt flank)
GUGGCUUGCUCUUAUAAGGUGCAGAAUUAUUUUUGCAAUAUGUUCCUGAUAUGUAAUAUAUAAGUAUAUUGGGAACAUUUUGCAUCCAUAGUUUUGUAUCAAUAUAUGGAGACAAGACU
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Structure
        10          20        30        40        50         
GUGGCUUGCUCUUAUAA--|            UUU     U       UG    GUAAUA 
                   GGUGCAGAAUUAU   UGCAA AUGUUCC  AUAU      \
                   CUAUGUUUUGAUA   ACGUU UACAAGG  UAUA      U
UCAGAACAGAGGUAUAUAA^            CCU     U       GU    UGAAUA 
       110       100        90        80        70        60
Deep sequencing
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3' NTU Unknown
MotifsNo
Tissue expression
-   +
Bl Bl Bl Bl Oo Oo Oo Oo To Wh
Mature sequence

Cpo-Mir-450-P3_5p
mirBase accessionMIMAT0047264
Sequence 
0- UUUUGCAAUAUGUUCCUGAUAU -22
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Star sequence

Cpo-Mir-450-P3_3p* (predicted)
mirBase accessionMIMAT0047265
Sequence 
37- AUUGGGAACAUUUUGCAUCCAU -59
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