MirGeneDB 2.1

MirGeneDB ID

Dno-Mir-450-P3

Family name MIR-450 (all species)
Seed UUUGCAA
Species Nine-banded armadillo (Dasypus novemcinctus)
MiRBase ID dno-mir-450b
Paralogues Dno-Mir-450-P1  Dno-Mir-450-P2 
Orthologues Bta-Mir-450-P3  Cfa-Mir-450-P3  Cpo-Mir-450-P3  Hsa-Mir-450-P3  Mml-Mir-450-P3  Mmu-Mir-450-P3  Ocu-Mir-450-P3  Rno-Mir-450-P3a  Rno-Mir-450-P3b 
Node of Origin (locus) Eutheria
Node of Origin (family) Eutheria
Genome context
(dasNov3)
JH573198: 469158-469215 [+] UCSC Ensembl
Clustered miRNAs
(< 50kb from Mir-450-P3)
Mir-15-P1c JH573198: 462451-462509 [+] UCSC Ensembl
Mir-15-P2c JH573198: 462819-462881 [+] UCSC Ensembl
Mir-542-v1 JH573198: 468016-468075 [+] UCSC Ensembl
Mir-542-v2 JH573198: 468017-468074 [+] UCSC Ensembl
Mir-450-P1 JH573198: 468836-468892 [+] UCSC Ensembl
Mir-450-P2 JH573198: 468989-469045 [+] UCSC Ensembl
Mir-450-P3 JH573198: 469158-469215 [+] UCSC Ensembl
Precursor
(pre-Mir +30nt flank)
CAAAGUGAUAAAAGUAAGGUACAAAAUUAUUUUUGCAAUAUGUUCCUGAAUAUGUAAUAUAAGUGUAUUGGGAGCAUUUUGCAUCCAUAGUUUUGUAUCAAUAUAUGGAAAAAAGGCU
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Structure
        10          20        30        40        50        
CAAAGUGAUAAAAGUAA--|            UUU     U       UG AUAUGUAA 
                   GGUACAAAAUUAU   UGCAA AUGUUCC  A        U
                   CUAUGUUUUGAUA   ACGUU UACGAGG  U        A
UCGGAAAAAAGGUAUAUAA^            CCU     U       GU AUGUGAAU 
      110       100        90        80        70        60
Deep sequencing
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3' NTU No
MotifsUGUG in loop
Tissue expression
 +
To
Mature sequence

Dno-Mir-450-P3_5p

mirBase accessionMIMAT0047899
Sequence
0- UUUUGCAAUAUGUUCCUGAAUA -22
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Star sequence

Dno-Mir-450-P3_3p*

mirBase accessionMIMAT0047900
Sequence
37- UUGGGAGCAUUUUGCAUCCAU -58
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