MirGeneDB 3.0

MirGeneDB ID

Mmr-Mir-450-P3

Family name MIR-450 (all species)
Seed UUUGCAA
Species Gray mouse lemur (Microcebus murinus)
MiRBase ID
Paralogues Mmr-Mir-450-P1  Mmr-Mir-450-P2 
Orthologues Bta-Mir-450-P3  Cfa-Mir-450-P3  Cja-Mir-450-P3  Cpo-Mir-450-P3  Dno-Mir-450-P3  Eca-Mir-450-P3  Hsa-Mir-450-P3  Laf-Mir-450-P3  Mml-Mir-450-P3  Mmu-Mir-450-P3  Ocu-Mir-450-P3  Pab-Mir-450-P3  Rno-Mir-450-P3a  Rno-Mir-450-P3b 
Node of Origin (locus) Eutheria
Node of Origin (family) Eutheria
Genome context
(GCA_000165445.3_Mmur_3.0_genomic)
CM007693.1: 64870489-64870546 [-] UCSC Ensembl
Clustered miRNAs
(< 50kb from Mir-450-P3)
Mir-542-v1 CM007693.1: 64871640-64871698 [-] UCSC Ensembl
Mir-542-v2 CM007693.1: 64871641-64871697 [-] UCSC Ensembl
Mir-15-P1c CM007693.1: 64876908-64876966 [-] UCSC Ensembl
Precursor
(pre-Mir +30nt flank)
UUUUGUAAUAAAGGUAAAGUGCAGAAUUAUUUUUGCAAUGUUUUCCUGGAUAUGUAAUAUACAUGUAUUGGGAACAUUUUGCAUCCAUAGUUUUGUAUCAAUGUAUGGAGAAAAAGCU
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Structure
        10          20        30        40        50         
UUUUGUAAUAAAGGUAAA--|           UUU     U  U    UG A   GUAAU 
                    GUGCAGAAUUAU   UGCAA GU UUCC  G UAU     \
                    UAUGUUUUGAUA   ACGUU UA AAGG  U AUG     A
UCGAAAAAGAGGUAUGUAAC^           CCU     U  C    GU -   UACAU 
      110       100        90        80        70         60
Deep sequencing
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3' NTU Unknown
MotifsNo
Tissue expression
 +
Mu Mu Mu Mu Mu Mu Mu Mu
Mature sequence

Mmr-Mir-450-P3_5p (predicted)

mirBase accessionNone
Sequence
0- UUUUGCAAUGUUUUCCUGGAUAU -23
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Star sequence

Mmr-Mir-450-P3_3p* (predicted)

mirBase accessionNone
Sequence
36- AUUGGGAACAUUUUGCAUCCAU -58
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