MirGeneDB 3.0

MirGeneDB ID

Mmr-Mir-450-P1

Family name MIR-450 (all species)
Seed UUUGCGA
Species Gray mouse lemur (Microcebus murinus)
MiRBase ID
Paralogues Mmr-Mir-450-P2  Mmr-Mir-450-P3 
Orthologues Bta-Mir-450-P1  Cfa-Mir-450-P1  Cja-Mir-450-P1  Cpo-Mir-450-P1  Dno-Mir-450-P1  Eca-Mir-450-P1  Hsa-Mir-450-P1  Laf-Mir-450-P1  Mml-Mir-450-P1  Mmu-Mir-450-P1  Ocu-Mir-450-P1  Pab-Mir-450-P1  Rno-Mir-450-P1a  Rno-Mir-450-P1b 
Node of Origin (locus) Eutheria
Node of Origin (family) Eutheria
Genome context
(GCA_000165445.3_Mmur_3.0_genomic)
CM007693.1: 64870824-64870880 [-] UCSC Ensembl
Clustered miRNAs
(< 50kb from Mir-450-P1)
Mir-542-v1 CM007693.1: 64871640-64871698 [-] UCSC Ensembl
Mir-542-v2 CM007693.1: 64871641-64871697 [-] UCSC Ensembl
Mir-15-P1c CM007693.1: 64876908-64876966 [-] UCSC Ensembl
Precursor
(pre-Mir +30nt flank)
UAAGUUAUCAAAAAAAAGAUGCUAAACUAUUUUUGCGAUGUGUUCCUAAUAUGUAAUAUAAAUGUAUUGGGAACAUUUUGCAUUCAUAGUUUUGUAUCAAUAAUAUGGGAAAGAGGC
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Structure
        10          20        30        40        50        
UAAGUUAUCAAAAAAAA--|    U       UUU     U             GUAAU 
                   GAUGC AAACUAU   UGCGA GUGUUCCUAAUAU     \
                   CUAUG UUUGAUA   ACGUU UACAAGGGUUAUG     A
CGGAGAAAGGGUAUAAUAA^    U       CUU     U             UAAAU 
     110       100        90        80        70        60
Deep sequencing
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CommentThere is a second Dicer cut -1 on both arms.
3' NTU Unknown
MotifsNo
Tissue expression
 +
Mu Mu Mu Mu Mu Mu Mu Mu
Mature sequence

Mmr-Mir-450-P1_5p

mirBase accessionNone
Sequence
0- UUUUGCGAUGUGUUCCUAAUAU -22
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Star sequence

Mmr-Mir-450-P1_3p* (predicted)

mirBase accessionNone
Sequence
35- AUUGGGAACAUUUUGCAUUCAU -57
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