MirGeneDB 3.0
MirGeneDB ID

Eca-Mir-450-P1

Family name MIR-450 (all species)
Seed UUUGCGA
Species Horse (Equus caballus)
MiRBase ID eca-mir-450c
Paralogues Eca-Mir-450-P2  Eca-Mir-450-P3 
Orthologues Bta-Mir-450-P1  Cfa-Mir-450-P1  Cja-Mir-450-P1  Cpo-Mir-450-P1  Dno-Mir-450-P1  Hsa-Mir-450-P1  Laf-Mir-450-P1  Mml-Mir-450-P1  Mmr-Mir-450-P1  Mmu-Mir-450-P1  Ocu-Mir-450-P1  Pab-Mir-450-P1  Rno-Mir-450-P1a  Rno-Mir-450-P1b 
Node of Origin (locus) Eutheria
Node of Origin (family) Eutheria
Genome context
(GCA_002863925.1_EquCab3.0)		 CM009179.1: 111015538-111015594 [-] UCSC Ensembl
Clustered miRNAs
(< 50kb from Mir-450-P1)		 Mir-450-P3 CM009179.1: 111015235-111015292 [-] UCSC Ensembl
Mir-450-P2 CM009179.1: 111015405-111015461 [-] UCSC Ensembl
Mir-450-P1 CM009179.1: 111015538-111015594 [-] UCSC Ensembl
Mir-542-v1 CM009179.1: 111016323-111016381 [-] UCSC Ensembl
Mir-15-P2c CM009179.1: 111021117-111021179 [-] UCSC Ensembl
Mir-15-P1c CM009179.1: 111021472-111021530 [-] UCSC Ensembl
Precursor
(pre-Mir +30nt flank)
AUAAGUGAUCAAAGAAAGAUGCUCAACUAUUUUUGCGAUGUGUUCCUAAUACGUAAUAUAAAUGUAUUGGGAACAUUUUGCAUUCAUAGUUUUGUAUCAAUAAUAUGGAAAGAAGGC
Get precursor sequence
Structure
        10          20        30        40        50        
AUAAGUGAUCAAAGAAA--|    UC      UUU     U             GUAAU 
                   GAUGC  AACUAU   UGCGA GUGUUCCUAAUAC     \
                   CUAUG  UUGAUA   ACGUU UACAAGGGUUAUG     A
CGGAAGAAAGGUAUAAUAA^    UU      CUU     U             UAAAU 
     110       100        90        80        70        60
Deep sequencing
Go to detailed chart
3' NTU No
MotifsNo
Tissue expression
-   +
Ps Bo Ca Em En En En En En En En Gl He He Ho Im Ki Li Lo Lu Ma Ma Mi Pl Sp Te Tr Ut Ut Yo
Mature sequence

Eca-Mir-450-P1_5p
mirBase accessionMIMAT0013222
Sequence 
0- UUUUGCGAUGUGUUCCUAAUAC -22
Get sequence
Star sequence

Eca-Mir-450-P1_3p*
mirBase accessionNone
Sequence 
35- AUUGGGAACAUUUUGCAUUCAU -57
Get sequence