| MirGeneDB ID | Cja-Mir-450-P1 |
|---|---|
| Family name | MIR-450 (all species) |
| Seed | UUUGCGA |
| Species | White-tufted-ear marmoset (Callithrix jacchus) |
| MiRBase ID | |
| Paralogues | Cja-Mir-450-P2 Cja-Mir-450-P3 |
| Orthologues | Bta-Mir-450-P1 Cfa-Mir-450-P1 Cpo-Mir-450-P1 Dno-Mir-450-P1 Eca-Mir-450-P1 Hsa-Mir-450-P1 Laf-Mir-450-P1 Mml-Mir-450-P1 Mmr-Mir-450-P1 Mmu-Mir-450-P1 Ocu-Mir-450-P1 Pab-Mir-450-P1 Rno-Mir-450-P1a Rno-Mir-450-P1b |
| Node of Origin (locus) | Eutheria |
| Node of Origin (family) | Eutheria |
| Genome context (GCA_011100555.2_mCalJa1.2.pat.X_genomic) |
CM021937.1: 126002435-126002491 [-] UCSC Ensembl |
| Precursor (pre-Mir +30nt flank) | AAAAGUGACCAAGGAAAGAUGCUGAACUAUUUUUGCGAAGUGUUCCUAAUAUGUAAUAUAAAUGUAUUGGGGACAUUUUGCAAUCAUAGUUUUGUAUCAAUAAUAUUGGAAAAAAAGGet precursor sequence |
| Structure | 10 20 30 40 50 AAAAGUGACCAAGGAAA--| U UU GUAAU GAUGC GAACUAU UUGCGAAGUGUUCCUAAUAU \ CUAUG UUUGAUA AACGUUUUACAGGGGUUAUG A GAAAAAAAGGUUAUAAUAA^ U CU UAAAU 110 100 90 80 70 60 |
| Deep sequencing | |
| 3' NTU | Unknown |
| Motifs | No |
| Mature sequence | Cja-Mir-450-P1_5p |
| mirBase accession | None |
| Sequence |
0- UUUUGCGAAGUGUUCCUAAUAU -22
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|
| Star sequence | Cja-Mir-450-P1_3p* |
| mirBase accession | None |
| Sequence |
35- AUUGGGGACAUUUUGCAAUCAU -57
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|
