MirGeneDB 2.1

MirGeneDB ID

Mmu-Mir-450-P1

Family name MIR-450 (all species)
Seed UUUGCGA
Species House mouse (Mus musculus)
MiRBase ID mmu-mir-450a-2
Paralogues Mmu-Mir-450-P2  Mmu-Mir-450-P3 
Orthologues Bta-Mir-450-P1  Cfa-Mir-450-P1  Cpo-Mir-450-P1  Dno-Mir-450-P1  Hsa-Mir-450-P1  Mml-Mir-450-P1  Ocu-Mir-450-P1  Rno-Mir-450-P1a  Rno-Mir-450-P1b 
Node of Origin (locus) Eutheria
Node of Origin (family) Eutheria
Genome context
(mm10)
chrX: 53048304-53048360 [-] UCSC Ensembl
Clustered miRNAs
(< 50kb from Mir-450-P1)
Mir-450-P3 chrX: 53048008-53048065 [-] UCSC Ensembl
Mir-450-P2 chrX: 53048171-53048227 [-] UCSC Ensembl
Mir-450-P1 chrX: 53048304-53048360 [-] UCSC Ensembl
Mir-542 chrX: 53049414-53049474 [-] UCSC Ensembl
Mir-351 chrX: 53053276-53053338 [-] UCSC Ensembl
Mir-15-P2c chrX: 53053987-53054049 [-] UCSC Ensembl
Mir-15-P1c-v3 chrX: 53054268-53054329 [-] UCSC Ensembl
Mir-15-P1c-v2 chrX: 53054269-53054328 [-] UCSC Ensembl
Mir-15-P1c-v1 chrX: 53054270-53054327 [-] UCSC Ensembl
Precursor
(pre-Mir +30nt flank)
GGAGAAAGGCAAACCAAGAUGCUGAACUAUUUUUGCGAUGUGUUCCUAAUAUGUACUAUGAGUAUAUUGGGGAUGCUUUGCAUUCAUGGUUCUGCAUCCAUCAUAUGGACAGUCACC
Get precursor sequence
Structure
        10          20        30        40        50        
GGAGAAAGGCAAACCAA--|    U       UUU     U             GUACU 
                   GAUGC GAACUAU   UGCGA GUGUUCCUAAUAU     \
                   CUACG CUUGGUA   ACGUU CGUAGGGGUUAUA     A
CCACUGACAGGUAUACUAC^    U       CUU     U             UGAGU 
     110       100        90        80        70        60
Deep sequencing
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3' NTU No
MotifsNo
Tissue expression
 +
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Mature sequence

Mmu-Mir-450-P1_5p

mirBase accessionMIMAT0001546
Sequence
0- UUUUGCGAUGUGUUCCUAAUAU -22
Get sequence
Proposed targets microrna.org: MIMAT0001546
TargetScanVert: mmu-miR-450a-5p
miRDB: MIMAT0001546
Star sequence

Mmu-Mir-450-P1_3p*

mirBase accessionMIMAT0004789
Sequence
35- AUUGGGGAUGCUUUGCAUUCAU -57
Get sequence
Proposed targets microrna.org: MIMAT0004789
TargetScanVert: mmu-miR-450a-2-3p
miRDB: MIMAT0004789