MirGeneDB 2.1

MirGeneDB ID

Mml-Mir-450-P1

Family name MIR-450 (all species)
Seed UUUGCGA
Species Rhesus monkey (Macaca mulatta)
MiRBase ID mml-mir-450a-2
Paralogues Mml-Mir-450-P2  Mml-Mir-450-P3 
Orthologues Bta-Mir-450-P1  Cfa-Mir-450-P1  Cpo-Mir-450-P1  Dno-Mir-450-P1  Hsa-Mir-450-P1  Mmu-Mir-450-P1  Ocu-Mir-450-P1  Rno-Mir-450-P1a  Rno-Mir-450-P1b 
Node of Origin (locus) Eutheria
Node of Origin (family) Eutheria
Genome context
(rheMac8_trace)
chrX: 128512325-128512381 [-] UCSC Ensembl
Clustered miRNAs
(< 50kb from Mir-450-P1)
Mir-450-P3 chrX: 128511991-128512048 [-] UCSC Ensembl
Mir-450-P2 chrX: 128512154-128512210 [-] UCSC Ensembl
Mir-450-P1 chrX: 128512325-128512381 [-] UCSC Ensembl
Mir-542-v1 chrX: 128513154-128513212 [-] UCSC Ensembl
Mir-542-v2 chrX: 128513155-128513211 [-] UCSC Ensembl
Mir-15-P2c chrX: 128518112-128518174 [-] UCSC Ensembl
Mir-15-P1c chrX: 128518445-128518503 [-] UCSC Ensembl
Precursor
(pre-Mir +30nt flank)
AAAAGUGACCAAAGAAAGAUGCUAAACUAUUUUUGCGAUGUGUUCCUAAUAUGUAAUAUAAAUGUAUUGGGGACAUUUUGCAUUCAUAGUUUUGUAUCAAUAAUAUGGGGGGAAAAG
Get precursor sequence
Structure
        10          20        30        40        50        
AAAAGUGACCAAAGAAA--|    U       UUU     U             GUAAU 
                   GAUGC AAACUAU   UGCGA GUGUUCCUAAUAU     \
                   CUAUG UUUGAUA   ACGUU UACAGGGGUUAUG     A
GAAAAGGGGGGUAUAAUAA^    U       CUU     U             UAAAU 
     110       100        90        80        70        60
Deep sequencing
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CommentThere is a second Dicer cut -1 on both arms.
3' NTU No
MotifsNo
Tissue expression
 +
Bo Br Br Br He Ki Li Lu Ly Sk Sp Te Th
Mature sequence

Mml-Mir-450-P1_5p

mirBase accessionMIMAT0006332
Sequence
0- UUUUGCGAUGUGUUCCUAAUAU -22
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Proposed targets TargetScanVert: mml-miR-450a-5p
Star sequence

Mml-Mir-450-P1_3p*

mirBase accessionMIMAT0031019
Sequence
35- AUUGGGGACAUUUUGCAUUCAU -57
Get sequence
Proposed targets TargetScanVert: mml-miR-450a-2-3p