| MirGeneDB ID | Ofu-Mir-2692 |
|---|
| Family name |
MIR-2692 (all species) |
|---|
| Seed |
CAGUCAA |
|---|
| Species |
tubeworm (Owenia fusiformis) |
|---|
| MiRBase ID |
|
|---|
| Paralogues |
|
|---|
| Orthologues |
Cte-Mir-2692
Pdu-Mir-2692
|
|---|
| Node of Origin (locus) |
Annelida
|
|---|
| Node of Origin (family) |
Annelida
|
|---|
Genome context
(GCA_903813345.2_Owenia) |
CAIIXF020000006.1: 29791862-29791922 [-]
|
|---|
Precursor
(pre-Mir +30nt flank) |
AGCAAAGGGAAAUGGAUGAAGUUAGCUAGUGUUGGUGUCAAAUUGACAGAGUGUACAUUUUAUAUUCACCAGUCAAUUUUGACACCACCGCUUGAAAACUUUAACGAUCUACAGACUCCGG
Get precursor sequence
|
|---|
| Structure | 10 20 30 40 50
AGCAAAGGGAAAUGGAU-- AGCU U -| AGA UACAUU
GAAGUU AGUG UGGUGUC AAAUUGAC GUG \
UUUCAA UCGC ACCACAG UUUAACUG CAC U
GGCCUCAGACAUCUAGCAA AAGU C U^ AC- UUAUAU
. 110 100 90 80 70 |
|---|
| Deep sequencing |
Go to detailed chart
|
|---|
| 3' NTU |
No
|
|---|
| Motifs | UG at 5p(-14), CNNC at 3p(+17) |
|---|
Tissue expression
|
|
|---|
| Star sequence |
Ofu-Mir-2692_5p* (predicted) |
| mirBase accession | None |
|---|
| Sequence |
0- GUUGGUGUCAAAUUGACAGAGUG -23
Get sequence
|
|---|
| Mature sequence |
Ofu-Mir-2692_3p |
| mirBase accession | None |
|---|
| Sequence |
38- CCAGUCAAUUUUGACACCACCGC -61
Get sequence
|
|---|
