MirGeneDB ID | Ofu-Mir-2692 |
Family name |
MIR-2692 (all species) |
Seed |
CAGUCAA |
Species |
Tubeworm (Owenia fusiformis) |
MiRBase ID |
|
Paralogues |
|
Orthologues |
Cte-Mir-2692
Pdu-Mir-2692
|
Node of Origin (locus) |
Annelida
|
Node of Origin (family) |
Annelida
|
Genome context (GCA_903813345.2_Owenia) |
CAIIXF020000006.1: 29791862-29791922 [-]
|
Precursor (pre-Mir +30nt flank) |
AGCAAAGGGAAAUGGAUGAAGUUAGCUAGUGUUGGUGUCAAAUUGACAGAGUGUACAUUUUAUAUUCACCAGUCAAUUUUGACACCACCGCUUGAAAACUUUAACGAUCUACAGACUCCGG
Get precursor sequence
|
Structure | 10 20 30 40 50
AGCAAAGGGAAAUGGAU-- AGCU U -| AGA UACAUU
GAAGUU AGUG UGGUGUC AAAUUGAC GUG \
UUUCAA UCGC ACCACAG UUUAACUG CAC U
GGCCUCAGACAUCUAGCAA AAGU C U^ AC- UUAUAU
. 110 100 90 80 70 |
Deep sequencing |
|
3' NTU |
No
|
Motifs | UG at 5p(-14), CNNC at 3p(+17) |
Tissue expression
|
|
Star sequence |
Ofu-Mir-2692_5p* (predicted) |
mirBase accession | None |
Sequence |
0- GUUGGUGUCAAAUUGACAGAGUG -23
Get sequence
|
Mature sequence |
Ofu-Mir-2692_3p |
mirBase accession | None |
Sequence |
38- CCAGUCAAUUUUGACACCACCGC -61
Get sequence
|