| MirGeneDB ID | Pdu-Mir-2692 |
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| Family name |
MIR-2692 (all species) |
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| Seed |
CAGUCAA |
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| Species |
Dumerils clam worm (Platynereis dumerilii) |
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| MiRBase ID |
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| Paralogues |
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| Orthologues |
Cte-Mir-2692
Ofu-Mir-2692
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| Node of Origin (locus) |
Annelida
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| Node of Origin (family) |
Annelida
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Genome context
(GCA_026936325.1_EMBL_pdum_1.0) |
JAPTHN010000010.1: 42044738-42044800 [+]
Ensembl
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Precursor
(pre-Mir +30nt flank) |
GGACUUGGUUUACAUUUGGGGUUUUGCUAGGGUGAUGUCCCAUUGACUUUGGUGGGAUUUUGUAAAACACCAGUCAAUGUUGACACCACCGCUGGUAGAACUCCUGUAUCAUCAUCAUCAUCA
Get precursor sequence
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| Structure | 10 20 30 40 50 60
GGACUUGGUUUACAUUU-- - A C-| UU GGAUUU
GGGGUUUUGCUAG GGUG UGUC CAUUGACU GGUG \
CCUCAAGAUGGUC CCAC ACAG GUAACUGA CCAC U
ACUACUACUACUACUAUGU G C UU^ -- AAAAUG
120 110 100 90 80 70 |
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| Deep sequencing |
Go to detailed chart
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| 3' NTU |
No
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| Motifs | UG at 5p(-14), CNNC at 3p(+17) |
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Tissue expression
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| 24 |
24 |
24 |
24 |
24 |
36 |
36 |
36 |
36 |
36 |
48 |
48 |
48 |
48 |
48 |
6d |
6d |
6d |
6d |
72 |
72 |
72 |
72 |
72 |
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| Star sequence |
Pdu-Mir-2692_5p* |
| mirBase accession | None |
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| Sequence |
0- GGUGAUGUCCCAUUGACUUUGGUG -24
Get sequence
|
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| Mature sequence |
Pdu-Mir-2692_3p |
| mirBase accession | None |
|---|
| Sequence |
39- CCAGUCAAUGUUGACACCACCGCU -63
Get sequence
|
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