MirGeneDB ID | Ovu-Mir-137-v2 |
Family name |
MIR-137 (all species) |
Seed |
ACGGGUA |
Species |
Common octopus (Octopus vulgaris) |
MiRBase ID |
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Paralogues |
Ovu-Mir-137-v1
|
Orthologues |
Aga-Mir-137
Agr-Mir-137
Asu-Mir-137
Ava-Mir-137
Bfl-Mir-137
Bko-Mir-137
Bpl-Mir-137
Cbr-Mir-137
Cel-Mir-137
Cte-Mir-137
Dan-Mir-137
Dgr-Mir-137
Dma-Mir-137
Dme-Mir-137
Dmo-Mir-137
Dpu-Mir-137
Dsi-Mir-137
Dya-Mir-137
Eba-Mir-137
Ebu-Mir-137
Esc-Mir-137
Gpa-Mir-137
Hme-Mir-137
Hru-Mir-137
Isc-Mir-137
Lan-Mir-137
Lgi-Mir-137
Lhy-Mir-137
Llo-Mir-137
Mgi-Mir-137
Mom-Mir-137
Obi-Mir-137
Ofu-Mir-137
Pau-Mir-137
Pca-Mir-137
Pdu-Mir-137
Pfl-Mir-137-v2
Pmi-Mir-137-v2
Pve-Mir-137
Rph-Mir-137
Sko-Mir-137
Snu-Mir-137
Spu-Mir-137
Tca-Mir-137-v2
Tur-Mir-137
War-Mir-137
Xbo-Mir-137
|
Node of Origin (locus) |
Bilateria
|
Node of Origin (family) |
Bilateria
|
Genome context (GCA_003957725.1_ASM395772v1_OVU) |
RXHP01002239.1: 63692-63753 [+]
Ensembl
|
Precursor (pre-Mir +30nt flank) |
CCCACAGAGAAGCGAAAGAGCCGCGUUGACAACGGGUAUUCUUAGGUUAAUAAUACCAGACAGAGUUGUUAUUGCUUGAGAAUACACGUAAUCGACUGGUCUCUCCAAACAGCACAAAUCUU
Get precursor sequence
|
Structure | 10 20 30 40 50
CCCACAGAGAAGCGAAA-- - C CA G --| AAUACCA
GAG CCG GUUGA ACG GUAUUCUUAGGU UAAU G
CUC GGU CAGCU UGC CAUAAGAGUUCG AUUG A
UUCUAAACACGACAAACCU U - AA A UU^ UUGAGAC
120 110 100 90 80 70 60 |
Deep sequencing |
Go to detailed chart
|
3' NTU |
No
|
Motifs | CNNC at 3p(+17) |
Tissue expression
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Ax |
Ce |
Fr |
He |
In |
Op |
Op |
Pe |
Po |
Re |
Sk |
St |
Su |
Su |
Te |
Ve |
Vi |
Wh |
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Mature sequence |
Ovu-Mir-137-v2_5p |
mirBase accession | None |
Sequence |
0- AACGGGUAUUCUUAGGUUAAU -21
Get sequence
|
Co-mature sequence |
Ovu-Mir-137-v2_3p |
mirBase accession | None |
Sequence |
39- UAUUGCUUGAGAAUACACGUAAU -62
Get sequence
|