MirGeneDB 3.0

MirGeneDB ID

Pmi-Mir-137-v2

Family name MIR-137 (all species)
Seed UAUUGCU
Species Bat starfish (Patiria miniata)
MiRBase ID pmi-mir-137
Paralogues Pmi-Mir-137-v1 
Orthologues Aga-Mir-137  Agr-Mir-137  Asu-Mir-137  Ava-Mir-137  Bfl-Mir-137  Bko-Mir-137  Bpl-Mir-137  Cbr-Mir-137  Cel-Mir-137  Cte-Mir-137  Dan-Mir-137  Dgr-Mir-137  Dma-Mir-137  Dme-Mir-137  Dmo-Mir-137  Dpu-Mir-137  Dsi-Mir-137  Dya-Mir-137  Eba-Mir-137  Ebu-Mir-137  Esc-Mir-137  Gpa-Mir-137  Hme-Mir-137  Hru-Mir-137  Isc-Mir-137  Lan-Mir-137  Lgi-Mir-137  Lhy-Mir-137  Llo-Mir-137  Mgi-Mir-137  Mom-Mir-137  Obi-Mir-137  Ofu-Mir-137  Ovu-Mir-137-v2  Pau-Mir-137  Pca-Mir-137  Pdu-Mir-137  Pfl-Mir-137-v2  Pve-Mir-137  Rph-Mir-137  Sko-Mir-137  Snu-Mir-137  Spu-Mir-137  Tca-Mir-137-v2  Tur-Mir-137  War-Mir-137  Xbo-Mir-137 
Node of Origin (locus) Bilateria
Node of Origin (family) Bilateria
Genome context
(Pmin1)
JH769235.1: 38217-38276 [+]
Clustered miRNAs
(< 50kb from Mir-137-v2)
Mir-137-v1 JH769235.1: 38217-38276 [+]
Mir-137-v2 JH769235.1: 38217-38276 [+]
Precursor
(pre-Mir +30nt flank)
UGGCCGGGACCCACUACAGAUCCCUUGAUUACGGGUAUUCUCGGGUUAAUAAUACAGUUAAUUGAUGUUAUUGCUUGAGAAUACACGUAGUGACGGGUUCCCACGUCGACAGCGGCUCUC
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Structure
        10          20        30        40        50          
UGGCCGGGACCCACUACA--| U   UUG      G            U       CAGUU 
                    GA CCC   AUUACG GUAUUCUCGGGU AAUAAUA     \
                    CU GGG   UGAUGC CAUAAGAGUUCG UUAUUGU     A
CUCUCGGCGACAGCUGCACC^ U   CAG      A            -       AGUUA 
.       110       100        90        80         70
Deep sequencing
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3' NTU No
MotifsCNNC at 3p(+17)
Tissue expression
 +
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Star sequence

Pmi-Mir-137-v2_5p*

mirBase accessionNone
Sequence
0- ACGGGUAUUCUCGGGUUAAUAAUA -24
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Mature sequence

Pmi-Mir-137-v2_3p

mirBase accessionMIMAT0032160
Sequence
37- UUAUUGCUUGAGAAUACACGUAG -60
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