MirGeneDB 3.0
MirGeneDB ID

Pcr-Mir-10-P1o5

Family name MIR-10 (all species)
Seed AAUUCGA
Species Tiger flatworm (Prostheceraeus crozieri )
MiRBase ID
Paralogues Pcr-Mir-10-P1o4-v1  Pcr-Mir-10-P1o4-v2  Pcr-Mir-10-P3  Pcr-Mir-10-P4s1  Pcr-Mir-10-P4s2  Pcr-Mir-10-P4t 
Orthologues Aae-Mir-10-P1-v1  Aae-Mir-10-P1-v2  Adi-Mir-10  Aga-Mir-10-P1-v1  Aga-Mir-10-P1-v2  Agr-Mir-10-P1  Asp-Mir-10  Asu-Mir-10-P1  Bfl-Mir-10-P1-v1  Bfl-Mir-10-P1-v2  Bge-Mir-10-P1-v1  Bge-Mir-10-P1-v2  Bla-Mir-10-P1-v1  Bla-Mir-10-P1-v2  Cbr-Mir-10-P1  Cel-Mir-10-P1  Cte-Mir-10-P1  Dan-Mir-10-P1  Dgr-Mir-10-P1  Dlo-Mir-10-P1-v1  Dlo-Mir-10-P1-v2  Dma-Mir-10-P1-v1  Dma-Mir-10-P1-v2  Dme-Mir-10-P1  Dmo-Mir-10-P1  Dpu-Mir-10-P1-v1  Dpu-Mir-10-P1-v2  Dsi-Mir-10-P1  Dya-Mir-10-P1  Eba-Mir-10-P1  Efe-Mir-10-P1  Egr-Mir-10-P1  Gpa-Mir-10-P1  Gsp-Mir-10-P1  Hme-Mir-10-P1-v1  Hme-Mir-10-P1-v2  Hru-Mir-10-P1  Isc-Mir-10-P1-v1  Isc-Mir-10-P1-v2  Lgi-Mir-10-P1  Lhy-Mir-10-P1  Llo-Mir-10-P1  Lpo-Mir-10-P1o-v1  Lpo-Mir-10-P1o-v2  Mgi-Mir-10-P1  Mom-Mir-10-P1  Npo-Mir-10-P1  Nve-Mir-10  Ofu-Mir-10-P1  Pau-Mir-10-P1  Pca-Mir-10-P1  Pdu-Mir-10-P1  Pfl-Mir-10-P1  Pmi-Mir-10-P1  Pve-Mir-10-P1  Rph-Mir-10-P1  Sko-Mir-10-P1  Sma-Mir-10-P1  Snu-Mir-10-P1  Spu-Mir-10-P1  Tca-Mir-10-P1-v1  Tca-Mir-10-P1-v2  War-Mir-10-P1  Xbo-Mir-10-P1 
Node of Origin (locus) P. crozeri
Node of Origin (family) Eumetazoa
Genome context
(GCA_907163375.1_PROCRO_GENOME_genomic)		 CAJQUW010012110.1: 21417-21474 [-] Ensembl
Precursor
(pre-Mir +30nt flank)
CAUGGAAUAAUUGCGUCACCGCGAACACAAACCCUGUCGAUCCGAAUUUGAAAGUCAACAGAAGACAAAUUCGAGUCUACAGUGGUGCAAGCCGCGGUCUGAACAACAACGGGUCUCA
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Structure
        10           20        30         40        50        
CAUGGAAUAAUUGCGUC---|     AACACAA   -    C  UC        AAAGUCA 
                    ACCGCG       ACC CUGU GA  CGAAUUUG       \
                    UGGCGC       UGG GACA CU  GCUUAAAC       A
ACUCUGGGCAACAACAAGUC^     CGAACG-   U    U  GA        AGAAGAC 
      110       100        90         80        70        60
Deep sequencing
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CommentThere is a second Drosha cut -1 on both arms.
3' NTU No
MotifsCNNC at 3p(+17)
Tissue expression
-   +
To
Star sequence

Pcr-Mir-10-P1o5_5p*
mirBase accessionNone
Sequence 
0- ACCCUGUCGAUCCGAAUUUGA -21
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Mature sequence

Pcr-Mir-10-P1o5_3p
mirBase accessionNone
Sequence 
36- AAAUUCGAGUCUACAGUGGUGC -58
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